RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 USP34Q70CQ2 3546 aa17.66■□□□□ 0.42
PTN-201ENST00000348225 GLOD5A6NK44 160 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 GALR3O60755 368 aaPredicted RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 PRKRAO75569 313 aaKnown RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 ERAL1O75616 437 aaKnown RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 SLC34A2O95436 690 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 RETP07949 1114 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 SYPP08247 313 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 LIM2P55344 173 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 FADDQ13158 208 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 SPIDRQ14159 915 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 ANGPT1Q15389 498 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 VMACQ2NL98 169 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 PRTGQ2VWP7 1150 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 AMZ1Q400G9 498 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 TRIM61Q5EBN2 209 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 TBCELQ5QJ74 424 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 OR52E8Q6IFG1 317 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 FAM180BQ6P0A1 224 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 ZNF551Q7Z340 670 aaPredicted RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 ZZZ3Q8IYH5 903 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 SAMD14Q8IZD0 417 aaPredicted RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 ADGRG5Q8IZF4 528 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 CLEC4FQ8N1N0 589 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 Q8N9G6 341 aaPredicted RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 NRG4Q8WWG1 115 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 N4BP2L2Q92802 583 aaPredicted RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 NPLQ9BXD5 320 aaPredicted RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 CXorf36Q9H7Y0 433 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 ANKHQ9HCJ1 492 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 KLHL3Q9UH77 587 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 CES1P1Q9UKY3 287 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 MRPS2Q9Y399 296 aaKnown RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 NAALAD2Q9Y3Q0 740 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 ZNF780BQ9Y6R6 833 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 MN1Q10571 1320 aaPredicted RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 IGHV5-51A0A0C4DH38 117 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 PGRMC2O15173 223 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 HNRNPRO43390 633 aaKnown RBP17.65■□□□□ 0.42
PTN-201ENST00000348225 HCRTR1O43613 425 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 KCNK5O95279 499 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 C9P02748 559 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 AVPR2P30518 371 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 GPC1P35052 558 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 CRATP43155 626 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 ARL4DP49703 201 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 NCBP2P52298 156 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTN-201ENST00000348225 RUNX2Q13950 521 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 TRIP10Q15642 601 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 SPDYE7PQ495Y7 208 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 TCTE1Q5JU00 501 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.65■□□□□ 0.42
PTN-201ENST00000348225 SLC23A3Q6PIS1 610 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 FAM181AQ8N9Y4 354 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 OR5AK3PQ8NH89 298 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 PSMA8Q8TAA3 256 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 KLHL6Q8WZ60 621 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 UCN3Q969E3 161 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 CCDC74AQ96AQ1 378 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 AMDHD1Q96NU7 426 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 TRIM4Q9C037 500 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 STARD5Q9NSY2 213 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 KCMF1Q9P0J7 381 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 RIMS3Q9UJD0 308 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 ACSL6Q9UKU0 697 aa17.65■□□□□ 0.42
PTN-201ENST00000348225 BDP1A6H8Y1 2624 aa17.64■□□□□ 0.42
PTN-201ENST00000348225 MYO1GB0I1T2 1018 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 CASQ2O14958 399 aaPredicted RBP17.64■□□□□ 0.41
PTN-201ENST00000348225 B4GAT1O43505 415 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 CREG1O75629 220 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 C1QCP02747 245 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 FCGR1AP12314 374 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 CSNK2A2P19784 350 aaPredicted RBP17.64■□□□□ 0.41
PTN-201ENST00000348225 VEZF1Q14119 521 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 WDR74Q6RFH5 385 aaPredicted RBP17.64■□□□□ 0.41
PTN-201ENST00000348225 SPRED1Q7Z699 444 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 PPWD1Q96BP3 646 aaKnown RBP17.64■□□□□ 0.41
PTN-201ENST00000348225 ZNF285Q96NJ3 590 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 UGT2B28Q9BY64 529 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 CHST8Q9H2A9 424 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 GLIPR2Q9H4G4 154 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 SEMA3GQ9NS98 782 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 IRAK4Q9NWZ3 460 aa17.64■□□□□ 0.41
PTN-201ENST00000348225 SCN3AQ9NY46 2000 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 ARHGAP33O14559 1287 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 SIGLEC6O43699 453 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 MYF5P13349 255 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 HOXB6P17509 224 aaKnown RBP17.63■□□□□ 0.41
PTN-201ENST00000348225 CD1CP29017 333 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 MPIP34949 423 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 GABRA4P48169 554 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 SNRPNP63162 240 aaKnown RBP17.63■□□□□ 0.41
PTN-201ENST00000348225 CEBPEQ15744 281 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 GCNT6Q5T4J0 391 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 GARNL3Q5VVW2 1013 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 SAXO2Q658L1 398 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 PTOV1Q86YD1 416 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 C11orf65Q8NCR3 313 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 NEURL3Q96EH8 262 aa17.63■□□□□ 0.41
PTN-201ENST00000348225 CNRIP1Q96F85 164 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms