RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 STK19P49842 368 aaPredicted RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 AP3S2P59780 193 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 ZNF33BQ06732 778 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 GINS1Q14691 196 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 XKR7Q5GH72 579 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 APCDD1Q8J025 514 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 NAGSQ8N159 534 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 OR52N2Q8NGI0 321 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 SNX33Q8WV41 574 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 SRMSQ9H3Y6 488 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 UTS2RQ9UKP6 389 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 BRWD3Q6RI45 1802 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 SBF2Q86WG5 1849 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 CDK1P06493 297 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 SLC35G6P0C7Q6 338 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 BMP4P12644 408 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 MAT2AP31153 395 aaKnown RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 PCGF2P35227 344 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 EIPR1Q53HC9 387 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 ZNF648Q5T619 568 aaPredicted RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 KAT2AQ92830 837 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 NARS2Q96I59 477 aaKnown RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 IFT27Q9BW83 186 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 GSDMCQ9BYG8 508 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 OR51V1Q9H2C8 321 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 DPEP2Q9H4A9 486 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 PAQR5Q9NXK6 330 aaPredicted RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 PRSS21Q9Y6M0 314 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 HLA-DQA2P01906 255 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 C1GALT1C1LP0DN25 315 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 IL7P13232 177 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 MTHFD2P13995 350 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 FAUP35544 74 aaKnown RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 PPP3R1P63098 170 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 TMEM115Q12893 351 aaPredicted RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 C12orf66Q96MD2 445 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 ZFP3Q96NJ6 502 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 WACQ9BTA9 647 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 BTNL2Q9UIR0 455 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 MRTO4Q9UKD2 239 aaKnown RBP14.12□□□□□ -0.15
NUP50-201ENST00000347635 ACSL6Q9UKU0 697 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 SSC5DA1L4H1 1573 aa14.12□□□□□ -0.15
NUP50-201ENST00000347635 ETV3P41162 512 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 HSF2Q03933 536 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 CBLBQ13191 982 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 DSG2Q14126 1118 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 SMN1Q16637 294 aaKnown RBP14.11□□□□□ -0.15
NUP50-201ENST00000347635 WDR45BQ5MNZ6 344 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 ZNF433Q8N7K0 673 aaPredicted RBP14.11□□□□□ -0.15
NUP50-201ENST00000347635 OR4C6Q8NH72 309 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 KXD1Q9BQD3 176 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 OR51E2Q9H255 320 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 GPN3Q9UHW5 284 aaPredicted RBP14.11□□□□□ -0.15
NUP50-201ENST00000347635 E7EQ34 232 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 CACNG3O60359 315 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 MPIP34949 423 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 PIGAP37287 484 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 OMPP47874 163 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 CRTC1Q6UUV9 634 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 CBLL1Q75N03 491 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 OAFQ86UD1 273 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.11□□□□□ -0.15
NUP50-201ENST00000347635 TRAM1L1Q8N609 369 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 SLC38A3Q99624 504 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 MROQ9BYG7 248 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 CA5AP35218 305 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 C22orf42Q6IC83 251 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 C12orf76Q8N812 135 aaPredicted RBP14.11□□□□□ -0.15
NUP50-201ENST00000347635 OR5P2Q8WZ92 322 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 NELL2Q99435 816 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 FAM83CQ9BQN1 747 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 RTP3Q9BQQ7 232 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 CARD8Q9Y2G2 431 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 TCRBV5S2A0A599 114 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 CH25HO95992 272 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 HIST1H2ABP04908 130 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 GSTT2P0CG29 244 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 GSTT2BP0CG30 244 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 NR4A2P43354 598 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 DAPP51397 102 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 NADSYN1Q6IA69 706 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 XKRXQ6PP77 449 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 HIST3H2AQ7L7L0 130 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 FAM129CQ86XR2 697 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 ADGRG2Q8IZP9 1017 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 OR9Q2Q8NGE9 314 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 LRRC20Q8TCA0 184 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 HIST1H2ACQ93077 130 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 CLSTN3Q9BQT9 956 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 MRPS30Q9NP92 439 aaKnown RBP14.11□□□□□ -0.15
NUP50-201ENST00000347635 ZSCAN32Q9NX65 697 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 OR10H1Q9Y4A9 318 aa14.11□□□□□ -0.15
NUP50-201ENST00000347635 AQP9O43315 295 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 UGDHO60701 494 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 POP7O75817 140 aaKnown RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 KAT7O95251 611 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 MMP2P08253 660 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 CNR2P34972 360 aa14.1□□□□□ -0.15
NUP50-201ENST00000347635 POLR2IP36954 125 aaKnown RBP14.1□□□□□ -0.15
NUP50-201ENST00000347635 CLCN7P51798 805 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms