RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 RIMS3Q9UJD0 308 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 PCDHB10Q9UN67 800 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 IFT52Q9Y366 437 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 MAGED1Q9Y5V3 778 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 UBE2QL1A1L167 161 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 CCRL2O00421 344 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 FAUP35544 74 aaKnown RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 TPTEP56180 551 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 SIM1P81133 766 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 FOXC1Q12948 553 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 COL9A2Q14055 689 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 PYDC2Q56P42 97 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 CES4AQ5XG92 561 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 KLHL17Q6TDP4 642 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 FRRS1Q6ZNA5 592 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 NXPE1Q8N323 547 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 FAM122AQ96E09 287 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 GINS4Q9BRT9 223 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 NPLQ9BXD5 320 aaPredicted RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 MARCH7Q9H992 704 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 MCTS1Q9ULC4 181 aaKnown RBP10.44□□□□□ -0.74
CLCN6-202ENST00000346436 FADS2P1A8MWK0 482 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 CLIC1O00299 241 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 PLD2O14939 933 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 LPLP06858 475 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 TUBA4AP68366 448 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 TUBB3Q13509 450 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 NCEH1Q6PIU2 408 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 BLOC1S3Q6QNY0 202 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 AGTRAPQ6RW13 159 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 SCD5Q86SK9 330 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 AKAP14Q86UN6 197 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 ARHGAP12Q8IWW6 846 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 DIO2Q92813 273 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 COQ8BQ96D53 544 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 CASD1Q96PB1 797 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 USP22Q9UPT9 525 aa10.44□□□□□ -0.74
CLCN6-202ENST00000346436 A0A0G2JN53 185 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 CDC14CA4D256 554 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 EFCAB7A8K855 629 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 EFCAB9A8MZ26 197 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 SLC16A5O15375 505 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 GABBR2O75899 941 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 RASAL1O95294 804 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 FDXRP22570 491 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 CCNOP22674 350 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 RORAP35398 523 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 YPEL5P62699 121 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 KCNAB2Q13303 367 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 PUM1Q14671 1186 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLCN6-202ENST00000346436 BTBD16Q32M84 506 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF550Q7Z398 422 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 PAQR7Q86WK9 346 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 HS3ST5Q8IZT8 346 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM121BQ9BXQ6 578 aaPredicted RBP10.43□□□□□ -0.74
CLCN6-202ENST00000346436 COMMD9Q9P000 198 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 MANBAO00462 879 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 CSTBP04080 98 aaKnown RBP10.43□□□□□ -0.74
CLCN6-202ENST00000346436 DNAJB1P25685 340 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 TGFBR3Q03167 851 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 HNRNPA1L2Q32P51 320 aaKnown RBP10.43□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM35AQ53FP2 167 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 UMODL1-AS1Q8N2C9 162 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 METTL27Q8N6F8 245 aaPredicted RBP10.43□□□□□ -0.74
CLCN6-202ENST00000346436 SETD6Q8TBK2 473 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 OR1F2PQ96R84 312 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 NME7Q9Y5B8 376 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 SPO11Q9Y5K1 396 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 C7orf72A4D263 438 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 HRGP04196 525 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 SRFP11831 508 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 PRPS1L1P21108 318 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 SERTAD2Q14140 314 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 MELKQ14680 651 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 CLLU1OSQ5K130 101 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM240Q5SV17 173 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 ABHD5Q8WTS1 349 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 JPH3Q8WXH2 748 aaPredicted RBP10.43□□□□□ -0.74
CLCN6-202ENST00000346436 TWSG1Q9GZX9 223 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 DSN1Q9H410 356 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 NXT1Q9UKK6 140 aaKnown RBP10.43□□□□□ -0.74
CLCN6-202ENST00000346436 ZNF451Q9Y4E5 1061 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 STRCQ7RTU9 1775 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 TEX13CA0A0J9YWL9 993 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 ADAMDEC1O15204 470 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 GLULP15104 373 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 ARRB2P32121 409 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 ACADVLP49748 655 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 RPA4Q13156 261 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 CBFBQ13951 182 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 PTPRRQ15256 657 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 GPR68Q15743 365 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 ATP6AP1Q15904 470 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 SNAPC1Q16533 368 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 C1orf189Q5VU69 101 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 FAM69BQ5VUD6 431 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 TMEM178AQ8NBL3 297 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 NINJ1Q92982 152 aa10.43□□□□□ -0.74
CLCN6-202ENST00000346436 IER2Q9BTL4 223 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms