RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 RAB39BQ96DA2 213 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 RBM18Q96H35 190 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 FBRSL1Q9HCM7 1045 aaKnown RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 COLEC10Q9Y6Z7 277 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ATG2BQ96BY7 2078 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 A0A1W2PQL4 384 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 RFC2P35250 354 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 GSK3BP49841 420 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 CLCQ05315 142 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 PPIGQ13427 754 aaKnown RBP eCLIP9.98□□□□□ -0.812e-8■□□□□ 9.7
SPTBN1-201ENST00000333896 ABRAXAS2Q15018 415 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 PCBP1Q15365 356 aaKnown RBP eCLIP9.98□□□□□ -0.812e-8■■■■□ 23.8
SPTBN1-201ENST00000333896 NIPA1Q7RTP0 329 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 GPR149Q86SP6 731 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 MINDY1Q8N5J2 469 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 OR6Q1Q8NGQ2 317 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ORAI3Q9BRQ5 295 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 TBX22Q9Y458 520 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 GGT3PA6NGU5 568 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF891A8MT65 544 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 SLC22A5O76082 557 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 AGR2O95994 175 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 GGT2P36268 569 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 SGCBQ16585 318 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 TMEM31Q5JXX7 168 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ZFAND1Q8TCF1 268 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 IL4I1Q96RQ9 567 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ZBTB20Q9HC78 741 aaPredicted RBP9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 ACOT13Q9NPJ3 140 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 CACNG2Q9Y698 323 aa9.98□□□□□ -0.81
SPTBN1-201ENST00000333896 CLDN24A6NM45 220 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 A8MXE2 369 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 XYLBO75191 536 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 RBMXP38159 391 aaKnown RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 SLC1A3P43003 542 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 CMC1Q7Z7K0 106 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 LRRC28Q86X40 367 aaPredicted RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 HS3ST5Q8IZT8 346 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 OR4D6Q8NGJ1 314 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 GATA5Q9BWX5 397 aaPredicted RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 TMEM39BQ9GZU3 492 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ASB7Q9H672 318 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF701Q9NV72 531 aaPredicted RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 MIOSQ9NXC5 875 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 LAMP5Q9UJQ1 280 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 SPDEFO95238 335 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 DGKGP49619 791 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 GPAT4Q86UL3 456 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 LGI4Q8N135 537 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 FBXO15Q8NCQ5 510 aaPredicted RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 LRRN4Q8WUT4 740 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 HAS2Q92819 552 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 PTPRUQ92729 1446 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ZDBF2Q9HCK1 2354 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 POLEQ07864 2286 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ALPPP05187 535 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 MAXP61244 160 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 RBM39Q14498 530 aaKnown RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 GRIN2CQ14957 1233 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF527Q8NB42 609 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 NSMAFQ92636 917 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 PCDHB3Q9Y5E6 796 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 C9JVG2 144 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 C1QTNF3-AMACRE9PGA6 284 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 KHKP50053 298 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 CD81P60033 236 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 PMPCAQ10713 525 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 OTOP3Q7RTS5 596 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 PLD6Q8N2A8 252 aaKnown RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 RNF181Q9P0P0 153 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 KLHL9Q9P2J3 617 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 KANSL3Q9P2N6 904 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 PCDH17O14917 1159 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 CXCR1P25024 350 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 HTR1EP28566 365 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 POU4F3Q15319 338 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 SIAEQ9HAT2 523 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 HIF1ANQ9NWT6 349 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 CLTCQ00610 1675 aaKnown RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 A0A1B0GVT2 93 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 C20orf202A1L168 122 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 SLC25A27O95847 323 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 EFNA1P20827 205 aaPredicted RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 CCKBRP32239 447 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 NFIXQ14938 502 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 BIRC7Q96CA5 298 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 SAT2Q96F10 170 aaPredicted RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 NELL2Q99435 816 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 MYOCQ99972 504 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ZNF230Q9UIE0 474 aaPredicted RBP9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 TIMM22Q9Y584 194 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 C17orf113A0A1B0GUU1 675 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 FKTNO75072 461 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 PRPS1L1P21108 318 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 TAS2R50P59544 299 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ARHGAP1Q07960 439 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 PGM5Q15124 567 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ATAT1Q5SQI0 421 aa9.97□□□□□ -0.81
SPTBN1-201ENST00000333896 ZFP82Q8N141 532 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms