RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ANKDD1BA6NHY2 528 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 ADH5P11766 374 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 GTF2E2P29084 291 aaKnown RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 LRRC74AQ0VAA2 488 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 BCDIN3DQ7Z5W3 292 aaKnown RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 ARMC8Q8IUR7 673 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 DENND6BQ8NEG7 585 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 OR4D11Q8NGI4 311 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 POF1BQ8WVV4 589 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 APOBEC4Q8WW27 367 aaKnown RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 HTRA1Q92743 480 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 LGR4Q9BXB1 951 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 ZNF556Q9HAH1 456 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 ITM2CQ9NQX7 267 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 FTSJ1Q9UET6 329 aa12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 TMA7Q9Y2S6 64 aaKnown RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 FAM32AQ9Y421 112 aaKnown RBP12.78□□□□□ -0.36
TUBA1B-201ENST00000332858 CCNB2O95067 398 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 PIK3CBP42338 1070 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 LIMK1P53667 647 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 ST8SIA6P61647 398 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 HSPB3Q12988 150 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 IRF3Q14653 427 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 ARHGEF6Q15052 776 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 FRMPD2BQ6IN97 320 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 LYSMD2Q8IV50 215 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 FCGR1BQ92637 280 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 COL21A1Q96P44 957 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 C11orf16Q9NQ32 467 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 AP1M2Q9Y6Q5 423 aa12.77□□□□□ -0.36
TUBA1B-201ENST00000332858 AGAP5A6NIR3 686 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 STATHP02808 62 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 SRPRAP08240 638 aaKnown RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 ADRB3P13945 408 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 ITGA2P17301 1181 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PTX3P26022 381 aaPredicted RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 DDX6P26196 483 aaKnown RBP eCLIP12.77□□□□□ -0.371e-6■■■■■ 38.6
TUBA1B-201ENST00000332858 EIF2B2P49770 351 aaKnown RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 LSM11P83369 360 aaKnown RBP eCLIP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 COL9A2Q14055 689 aaPredicted RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 MED22Q15528 200 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 STEAP3Q658P3 488 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 COMTD1Q86VU5 262 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 CYP4Z2PQ8N1L4 340 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PSD4Q8NDX1 1056 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 OR2L2Q8NH16 312 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 TM4SF18Q96CE8 201 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 OTUB1Q96FW1 271 aaPredicted RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 RAD9AQ99638 391 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 LHX9Q9NQ69 397 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PCDHGA3Q9Y5H0 932 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 IRAK3Q9Y616 596 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 TRPM6Q9BX84 2022 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 ATG2BQ96BY7 2078 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 H7BY64 318 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PSMD11O00231 422 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 ZW10O43264 779 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 IFNW1P05000 195 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 RPLP0P05388 317 aaKnown RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 RHCEP18577 417 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 FNDC3BQ53EP0 1204 aaKnown RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 REEP3Q6NUK4 255 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PTCHD4Q6ZW05 846 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 LACC1Q8IV20 430 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 ZNF557Q8N988 423 aaPredicted RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 VANGL1Q8TAA9 524 aaPredicted RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 HPS1Q92902 700 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PDXPQ96GD0 296 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 TMEM19Q96HH6 336 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PAWRQ96IZ0 340 aaKnown RBP12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PRAP1Q96NZ9 151 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 MMP27Q9H306 513 aa12.77□□□□□ -0.37
TUBA1B-201ENST00000332858 PRAMEF27A3QJZ7 478 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 AQP9O43315 295 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 PI15O43692 258 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 UQCRC2P22695 453 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 UGT2B10P36537 528 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 MAGEA10P43363 369 aaPredicted RBP12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 MAPK9P45984 424 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 CRISP1P54107 249 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 MANFP55145 182 aaKnown RBP12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 CAMK1Q14012 370 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 C1orf53Q5VUE5 145 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 TCTN3Q6NUS6 607 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 MMAAQ8IVH4 418 aaKnown RBP12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 CELF5Q8N6W0 485 aaKnown RBP12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 NLNQ9BYT8 704 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 ANGPT4Q9Y264 503 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 ZAR1LA6NP61 321 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 UPK1BO75841 260 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 KRT75O95678 551 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 PRNPP04156 253 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 SPNP16150 400 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 BSGP35613 385 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 MAPK12P53778 367 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 TUBA1BP68363 451 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 TPRG1LQ5T0D9 272 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 USP43Q70EL4 1123 aa12.76□□□□□ -0.37
TUBA1B-201ENST00000332858 TUBA1AQ71U36 451 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms