RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 SERPINI2O75830 405 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 PAPLNO95428 1278 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 GPX2P18283 190 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 DCDC1P59894 354 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 KCNJ10P78508 379 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 HPCAP84074 193 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 MXD1Q05195 221 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 AQP6Q13520 282 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 KHDRBS2Q5VWX1 349 aaKnown RBP10.13□□□□□ -0.79
CUL4A-201ENST00000326335 KLHL35Q6PF15 583 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 SYCE2Q6PIF2 218 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 EIF3MQ7L2H7 374 aaKnown RBP10.13□□□□□ -0.79
CUL4A-201ENST00000326335 PAPD5Q8NDF8 572 aaKnown RBP10.13□□□□□ -0.79
CUL4A-201ENST00000326335 TP53INP1Q96A56 240 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 TEFMQ96QE5 360 aaKnown RBP10.13□□□□□ -0.79
CUL4A-201ENST00000326335 COPS4Q9BT78 406 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 DOHHQ9BU89 302 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 DPEP2Q9H4A9 486 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 SFXN1Q9H9B4 322 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 SEMA3GQ9NS98 782 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 GIN1Q9NXP7 522 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 MKLN1Q9UL63 735 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 GPR52Q9Y2T5 361 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 ATG4BQ9Y4P1 393 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 MDC1Q14676 2089 aaKnown RBP10.13□□□□□ -0.79
CUL4A-201ENST00000326335 GVINP1Q7Z2Y8 2422 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 TANC1Q9C0D5 1861 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 TRBV4-1A0A0J9YWV2 114 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 LRRTM2O43300 516 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 ABCB7O75027 752 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 BMP10O95393 424 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 IL1RNP18510 177 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 FPR1P21462 350 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 ITPRIPL2Q3MIP1 535 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 GGTA1PQ4G0N0 100 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 IFI44LQ53G44 452 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 TMEM196Q5HYL7 178 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 CALHM3Q86XJ0 350 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 CCDC71Q8IV32 467 aaPredicted RBP10.13□□□□□ -0.79
CUL4A-201ENST00000326335 SLC15A4Q8N697 577 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 OR8J2Q8NGG1 315 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 SLC38A5Q8WUX1 472 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 ALOXE3Q9BYJ1 711 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 DKK3Q9UBP4 350 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 KCNE3Q9Y6H6 103 aa10.13□□□□□ -0.79
CUL4A-201ENST00000326335 PTX3P26022 381 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-201ENST00000326335 NFATC3Q12968 1075 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 TARDBPQ13148 414 aaKnown RBP eCLIP10.12□□□□□ -0.793e-7■■■■□ 24.7
CUL4A-201ENST00000326335 NR1D2Q14995 579 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 TOR1AIP1Q5JTV8 583 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 XAF1Q6GPH4 301 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 LACC1Q8IV20 430 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ERI1Q8IV48 349 aaKnown RBP10.12□□□□□ -0.79
CUL4A-201ENST00000326335 APLFQ8IW19 511 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-201ENST00000326335 FAM9CQ8IZT9 166 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ZNF557Q8N988 423 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-201ENST00000326335 CXorf40BQ96DE9 158 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ART5Q96L15 291 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 CAMK1GQ96NX5 476 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 APOL4Q9BPW4 351 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 TCEAL2Q9H3H9 227 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-201ENST00000326335 TM9SF3Q9HD45 589 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ZNF282Q9UDV7 671 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-201ENST00000326335 CDH7Q9ULB5 785 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 PLXNB3Q9ULL4 1909 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 BCAS1O75363 584 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ACADLP28330 430 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 GRK3P35626 688 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 C21orf59P57076 290 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 PPP1CAP62136 330 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 C6orf132Q5T0Z8 1188 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 DEPDC1Q5TB30 811 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 CBLL1Q75N03 491 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ZNF438Q7Z4V0 828 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 SERPINA11Q86U17 422 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 GPR65Q8IYL9 337 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 SVOPLQ8N434 492 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 CCDC115Q96NT0 180 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 TTTY10Q9BZA0 68 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ADAP2Q9NPF8 381 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 MARK1Q9P0L2 795 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 MAN2B2Q9Y2E5 1009 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 LRRK1Q38SD2 2015 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 C4orf51C9J302 202 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 LDB3O75112 727 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 CD36P16671 472 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 HOXA9P31269 272 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 BCL6P41182 706 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 DNASE1L3Q13609 305 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ZNF793Q6ZN11 406 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 PAGE2Q7Z2X7 111 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 KLHDC8AQ8IYD2 350 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 OR9A2Q8NGT5 310 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 RPLP0P6Q8NHW5 317 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 LRIG1Q96JA1 1093 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 YIPF2Q9BWQ6 316 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 OR51I1Q9H343 314 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 ZBTB20Q9HC78 741 aaPredicted RBP10.12□□□□□ -0.79
CUL4A-201ENST00000326335 TVP23BQ9NYZ1 205 aa10.12□□□□□ -0.79
CUL4A-201ENST00000326335 CPSF4LA6NMK7 179 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms