RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 LAS2Q8IYD9 372 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 LMNTD1Q8N9Z9 388 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TMEM145Q8NBT3 493 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 BTN2A2Q8WVV5 523 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 MYO19Q96H55 970 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 KATNB1Q9BVA0 655 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CHST8Q9H2A9 424 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ZNF224Q9NZL3 707 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 GOLGA4Q13439 2230 aaKnown RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 C1orf226A1L170 272 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 SLC35F4A4IF30 521 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 E7EQ34 232 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 H3BNC9 293 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 GTPBP1O00178 669 aaKnown RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CD160O95971 181 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 PDGFAP04085 211 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 C1SP09871 688 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 PRKAR1AP10644 381 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ATF6P18850 670 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 HLA-DMAP28067 261 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 SSTR2P30874 369 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CHI3L1P36222 383 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ETV5P41161 510 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 PXNP49023 591 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ETV1P50549 477 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 RAB8AP61006 207 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 DUSP4Q13115 394 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TNK1Q13470 666 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TEAD4Q15561 434 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 GCNT6Q5T4J0 391 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 GDF6Q6KF10 455 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CREB3L2Q70SY1 520 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 OR8J2Q8NGG1 315 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 UBTD2Q8WUN7 234 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 DACT3Q96B18 629 aaPredicted RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 SMAD5Q99717 465 aaKnown RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 MAPKAP1Q9BPZ7 522 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 ACAT2Q9BWD1 397 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 SPATA9Q9BWV2 254 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 HDHD2Q9H0R4 259 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 NIPAL2Q9H841 368 aa9.22□□□□□ -0.93
PTPRA-202ENST00000318266 RBFOX1Q9NWB1 397 aaKnown RBP9.22□□□□□ -0.93
PTPRA-202ENST00000318266 TRAV6A0A075B6T7 132 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 SH3D21A4FU49 640 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 INMT-MINDY4F8WBC2 141 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 KLKB1P03952 638 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 SYPP08247 313 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 TYMPP19971 482 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 SLC9A3P48764 834 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 SLC11A2P49281 568 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 CDH4P55283 916 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 CDK6Q00534 326 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 MZT2BQ6NZ67 158 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 NCEH1Q6PIU2 408 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 SERPINA13PQ6UXR4 307 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 DEF8Q6ZN54 512 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 KCTD7Q96MP8 289 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 FAM193BQ96PV7 902 aaPredicted RBP9.21□□□□□ -0.93
PTPRA-202ENST00000318266 CTPS2Q9NRF8 586 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 DNAJC11Q9NVH1 559 aa9.21□□□□□ -0.93
PTPRA-202ENST00000318266 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.94
PTPRA-202ENST00000318266 IGLV3-27P01718 113 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 POLR2CP19387 275 aaPredicted RBP9.21□□□□□ -0.94
PTPRA-202ENST00000318266 GSTM5P46439 218 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 DOC2AQ14183 400 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 SEC23BQ15437 767 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 FCN2Q15485 313 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 RNASE12Q5GAN4 147 aaKnown RBP9.21□□□□□ -0.94
PTPRA-202ENST00000318266 BCL2L15Q5TBC7 163 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 CHCHD4Q8N4Q1 142 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 WBP2Q969T9 261 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 TBC1D17Q9HA65 648 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 CD84Q9UIB8 345 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 MGAT4AQ9UM21 535 aa9.21□□□□□ -0.94
PTPRA-202ENST00000318266 CORO1AP31146 461 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 HNF1BP35680 557 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 CD79BP40259 229 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 XCR1P46094 333 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 CPT1AP50416 773 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 AP2S1P53680 142 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 LIM2P55344 173 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 LSM11P83369 360 aaKnown RBP eCLIP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 FGFBP1Q14512 234 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 SLC5A12Q1EHB4 618 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 ZNF467Q7Z7K2 595 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 LAPTM4BQ86VI4 370 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 RBM45Q8IUH3 476 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 HS6ST3Q8IZP7 471 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 C9orf62Q8N4C0 152 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 NANOGP1Q8N7R0 232 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 GPR26Q8NDV2 337 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 GEMIN6Q8WXD5 167 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 MAGEB10Q96LZ2 347 aaPredicted RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 HHIPQ96QV1 700 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 DCLRE1CQ96SD1 692 aaKnown RBP9.2□□□□□ -0.94
PTPRA-202ENST00000318266 TMED9Q9BVK6 235 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 KCTD5Q9NXV2 234 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 PCDHB8Q9UN66 801 aa9.2□□□□□ -0.94
PTPRA-202ENST00000318266 GPR52Q9Y2T5 361 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms