RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 RUNX1T1Q06455 604 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 RAB33AQ14088 237 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 TBRG1Q3YBR2 411 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 GDPD4Q6W3E5 623 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 Q6ZVL8 140 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 PSD4Q8NDX1 1056 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 RNF170Q96K19 258 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 MSLNLQ96KJ4 702 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 EFCAB11Q9BUY7 163 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 MCOLN1Q9GZU1 580 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 PRM3Q9NNZ6 103 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 STARD7Q9NQZ5 370 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 SNX11Q9Y5W9 270 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 KIF26AQ9ULI4 1882 aaPredicted RBP18.2■□□□□ 0.5
RTN4-201ENST00000317610 CYP17A1P05093 508 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 CYP2A6P11509 494 aaPredicted RBP18.2■□□□□ 0.5
RTN4-201ENST00000317610 UQCRC2P22695 453 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 PRLHRP49683 370 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 TAS2R50P59544 299 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 SLC7A9P82251 487 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 MRPS15P82914 257 aaKnown RBP18.2■□□□□ 0.5
RTN4-201ENST00000317610 SCN1BQ07699 218 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 SLBPQ14493 270 aaKnown RBP eCLIP18.2■□□□□ 0.5
RTN4-201ENST00000317610 OCLNQ16625 522 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 MFSD4BQ5TF39 518 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 PHC2Q8IXK0 858 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 GALNT12Q8IXK2 581 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 RASGEF1AQ8N9B8 481 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 FBXO15Q8NCQ5 510 aaPredicted RBP18.2■□□□□ 0.5
RTN4-201ENST00000317610 SLC25A46Q96AG3 418 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 SSR3Q9UNL2 185 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 ICKQ9UPZ9 632 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 SH2B3Q9UQQ2 575 aa18.2■□□□□ 0.5
RTN4-201ENST00000317610 WASH3PC4AMC7 463 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 ATG13O75143 517 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 GUCY1B2O75343 617 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 IL1AP01583 271 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 NPPBP16860 134 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 SOAT1P35610 550 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 DGKEP52429 567 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 TBPL1P62380 186 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 SEC23BQ15437 767 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 BRAT1Q6PJG6 821 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 TCEAL8Q8IYN2 117 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 OR8J1Q8NGP2 316 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 ZNF480Q8WV37 535 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 BTN2A2Q8WVV5 523 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 ZSCAN5AQ9BUG6 496 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 RIOK2Q9BVS4 552 aaKnown RBP18.19■□□□□ 0.5
RTN4-201ENST00000317610 SLC22A4Q9H015 551 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 TMCC3Q9ULS5 477 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 CCDC88CQ9P219 2028 aa18.19■□□□□ 0.5
RTN4-201ENST00000317610 PIPSLA2A3N6 862 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 FAAHO00519 579 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 C1GALT1C1LP0DN25 315 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 ELAVL4P26378 380 aaKnown RBP18.18■□□□□ 0.5
RTN4-201ENST00000317610 CYP4F8P98187 520 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 SLAMF1Q13291 335 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 IKBIPQ70UQ0 350 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 WDR53Q7Z5U6 358 aaPredicted RBP18.18■□□□□ 0.5
RTN4-201ENST00000317610 CMTM8Q8IZV2 173 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 RDH10Q8IZV5 341 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 CLDN22Q8N7P3 220 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 GPR32P1Q8NGA4 272 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 SLC7A6Q92536 515 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 FOPNLQ96NB1 174 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 DEPDC7Q96QD5 511 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 POLR2J2Q9GZM3 115 aaKnown RBP18.18■□□□□ 0.5
RTN4-201ENST00000317610 MIXL1Q9H2W2 232 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 OR51B5Q9H339 312 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 A4GALTQ9NPC4 353 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 MRPL17Q9NRX2 175 aaKnown RBP18.18■□□□□ 0.5
RTN4-201ENST00000317610 SLC25A13Q9UJS0 675 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 WWP2O00308 870 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 GRM6O15303 877 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 SEMA7AO75326 666 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 TGFB1P01137 390 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 IGFBP1P08833 259 aaPredicted RBP18.18■□□□□ 0.5
RTN4-201ENST00000317610 AZGP1P25311 298 aaKnown RBP18.18■□□□□ 0.5
RTN4-201ENST00000317610 IRS1P35568 1242 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 FEN1P39748 380 aaKnown RBP18.18■□□□□ 0.5
RTN4-201ENST00000317610 ETV3P41162 512 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 RACK1P63244 317 aaKnown RBP18.18■□□□□ 0.5
RTN4-201ENST00000317610 XKRXQ6PP77 449 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 CCDC149Q6ZUS6 474 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 OR9Q1Q8NGQ5 310 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 TMEM169Q96HH4 297 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 SGPP1Q9BX95 441 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 TSSK6Q9BXA6 273 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 TMEM245Q9H330 911 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 TIGARQ9NQ88 270 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 TBC1D14Q9P2M4 693 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 SNX7Q9UNH6 387 aa18.18■□□□□ 0.5
RTN4-201ENST00000317610 A8MV72 311 aaPredicted RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 HEPACAM2A8MVW5 462 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 CACNB4O00305 520 aaPredicted RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 SAP18O00422 153 aaKnown RBP18.17■□□□□ 0.5
RTN4-201ENST00000317610 C1orf105O95561 183 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 CKMP06732 381 aa18.17■□□□□ 0.5
RTN4-201ENST00000317610 TGM4P49221 684 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms