RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SPNS1Q9H2V7 528 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 MRPS18AQ9NVS2 196 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SPATA6Q9NWH7 488 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 LEUTXA8MZ59 168 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TREHO43280 583 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SMAD6O43541 496 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 HLA-EP13747 358 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NAGAP17050 411 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CTRB1P17538 263 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 AOAHP28039 575 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ETV1P50549 477 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PER3P56645 1201 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TAP2Q03519 686 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SLC14A1Q13336 389 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 C18orf21Q32NC0 220 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CTRB2Q6GPI1 263 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SDE2Q6IQ49 451 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ANKRD54Q6NXT1 300 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 UTS2BQ765I0 119 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 KRT74Q7RTS7 529 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PLEKHH3Q7Z736 793 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TLK2Q86UE8 772 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 LRRC56Q8IYG6 542 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 C9orf62Q8N4C0 152 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SKA2Q8WVK7 121 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ASIC4Q96FT7 647 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 APIPQ96GX9 242 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CAMK1GQ96NX5 476 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ERMAPQ96PL5 475 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SORCS2Q96PQ0 1159 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 UBL7Q96S82 380 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF607Q96SK3 696 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SOSTQ9BQB4 213 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CHST8Q9H2A9 424 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 AHSPQ9NZD4 102 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 MAT2BQ9NZL9 334 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 COMMD3Q9UBI1 195 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PLEKHB1Q9UF11 243 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SCP2D1Q9UJQ7 156 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SCN9AQ15858 1988 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ADAMTSL1Q8N6G6 1762 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ZNFX1Q9P2E3 1918 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 MYO18AQ92614 2054 aaKnown RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 KCNE1BA0A087WTH5 132 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 WASHC1A8K0Z3 465 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 INPPL1O15357 1258 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 SOCS5O75159 536 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NUDT7P0C024 238 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ATF6P18850 670 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 HOXC8P31273 242 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ACSL1P33121 698 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 CNTN1Q12860 1018 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 Q5BKY6 102 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NADSYN1Q6IA69 706 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 TEX261Q6UWH6 196 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NAGSQ8N159 534 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 OR8K5Q8NH50 307 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ASB11Q8WXH4 323 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PLD4Q96BZ4 506 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 PPCDCQ96CD2 204 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 DPYSL5Q9BPU6 564 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 MIXL1Q9H2W2 232 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 FGF20Q9NP95 211 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 C1GALT1Q9NS00 363 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 ZNF224Q9NZL3 707 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 AKAP7Q9P0M2 348 aaPredicted RBP4.57□□□□□ -1.68
PTPN13-201ENST00000316707 MOSPD1Q9UJG1 213 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 NUBP2Q9Y5Y2 271 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 U3KQ87 197 aa4.57□□□□□ -1.68
PTPN13-201ENST00000316707 HMGB3O15347 200 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TSPAN3O60637 253 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLC6A1P30531 599 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 STAT5AP42229 794 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 RGRP47804 291 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 CDKN1CP49918 316 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 GBX2P52951 348 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 MXD1Q05195 221 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 GALEQ14376 348 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 LIPKQ5VXJ0 399 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 FAM219BQ5XKK7 198 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 LAMTOR1Q6IAA8 161 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TYW3Q6IPR3 259 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 TSEN54Q7Z6J9 526 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ASZ1Q8WWH4 475 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 ZBED6CLQ96FA7 236 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PDXPQ96GD0 296 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 FAM193BQ96PV7 902 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 LYSMD1Q96S90 227 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 NLNQ9BYT8 704 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PPIL3Q9H2H8 161 aaKnown RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLC6A15Q9H2J7 730 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 REEP4Q9H6H4 257 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 BPIFA1Q9NP55 256 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 AUP1Q9Y679 476 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SIP14410 1827 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 C1orf226A1L170 272 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 SLC9A3R1O14745 358 aaPredicted RBP4.56□□□□□ -1.68
PTPN13-201ENST00000316707 FABP7O15540 132 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PEX14O75381 377 aa4.56□□□□□ -1.68
PTPN13-201ENST00000316707 PSIP1O75475 530 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms