RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 ARAFP10398 606 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 JUNDP17535 347 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 CXCR2P25025 360 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 GDI1P31150 447 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 TAS2R38P59533 333 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 IRF4Q15306 451 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 SOWAHCQ53LP3 525 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 PRSS48Q7RTY5 328 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 NUDT13Q86X67 352 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 ARMC8Q8IUR7 673 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 KLHDC8AQ8IYD2 350 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 CENPSQ8N2Z9 138 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 LINC01555Q8NAE3 123 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D20Q96BZ9 403 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 LGALS12Q96DT0 336 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 INSM2Q96T92 566 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 MS4A8Q9BY19 250 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 ZBTB20Q9HC78 741 aaPredicted RBP10.99□□□□□ -0.65
PTPN2-201ENST00000309660 EQTNQ9NQ60 294 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 IRAK4Q9NWZ3 460 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 SEC14L3Q9UDX4 400 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 FBXW2Q9UKT8 454 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 POFUT2Q9Y2G5 429 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 HSPE1-MOB4S4R3N1 261 aa10.99□□□□□ -0.65
PTPN2-201ENST00000309660 CLDN25C9JDP6 229 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 GABARAPO95166 117 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 IGFBP1P08833 259 aaPredicted RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 OR12D1P0DN82 309 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 GGT2P36268 569 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 LIPAP38571 399 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 HNRNPFP52597 415 aaKnown RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 RAB8AP61006 207 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 CXCR4P61073 352 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 DGUOKQ16854 277 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 TIGD6Q17RP2 521 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 RGS21Q2M5E4 152 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 ZNF750Q32MQ0 723 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 METRNLQ641Q3 311 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 CLIP4Q8N3C7 705 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 CPA6Q8N4T0 437 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 TMEM145Q8NBT3 493 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 GOT1L1Q8NHS2 421 aaPredicted RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 TRMT61BQ9BVS5 477 aaKnown RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 ZCCHC3Q9NUD5 404 aaKnown RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 ACER3Q9NUN7 267 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 MS4A12Q9NXJ0 267 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 DAPK2Q9UIK4 370 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 TMCC3Q9ULS5 477 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 NAALAD2Q9Y3Q0 740 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 RWDD3Q9Y3V2 267 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 TRBV4-1A0A0J9YWV2 114 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 TMEM247A6NEH6 219 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 ANHXE9PGG2 379 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 BOLA2-SMG1P6H3BVE0 249 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 KMOO15229 486 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 GASTP01350 101 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 FUCA1P04066 466 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 INHBBP09529 407 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 NR2F1P10589 423 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 CCT3P49368 545 aaKnown RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 PCDH1Q08174 1060 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 ST3GAL4Q11206 333 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 MED22Q15528 200 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 SYPL1Q16563 259 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 TRIM16LQ309B1 348 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 PTCHD4Q6ZW05 846 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 RTL10Q7L3V2 364 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 RAB42Q8N4Z0 105 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 OR8K5Q8NH50 307 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 FBLIM1Q8WUP2 373 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 SH3YL1Q96HL8 342 aaPredicted RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 BBS4Q96RK4 519 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 PLA2G2FQ9BZM2 168 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 C6orf62Q9GZU0 229 aaPredicted RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 MTIF3Q9H2K0 278 aaKnown RBP10.98□□□□□ -0.65
PTPN2-201ENST00000309660 ANKRA2Q9H9E1 313 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 HCN2Q9UL51 889 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 HCN4Q9Y3Q4 1203 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 ENPP4Q9Y6X5 453 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 PLXND1Q9Y4D7 1925 aa10.98□□□□□ -0.65
PTPN2-201ENST00000309660 RFXAPO00287 272 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 SLC22A1O15245 554 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 ERI3O43414 337 aaKnown RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 AIREO43918 545 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 BSGP35613 385 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 RXRGP48443 463 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 E2F2Q14209 437 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 PTGES3Q15185 160 aaKnown RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 AGBL4Q5VU57 503 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 MEX3DQ86XN8 651 aaKnown RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 GGHQ92820 318 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 RPP25Q9BUL9 199 aaKnown RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TMEM38AQ9H6F2 299 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 NMNAT1Q9HAN9 279 aaPredicted RBP10.97□□□□□ -0.65
PTPN2-201ENST00000309660 HMG20AQ9NP66 347 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 SEMA3GQ9NS98 782 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 FBXL12Q9NXK8 326 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3DA0A087WVF3 549 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3IA0A087WXS9 549 aa10.97□□□□□ -0.65
PTPN2-201ENST00000309660 TBC1D3EA0A087X179 549 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms