RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GPR33Q49SQ1 333 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 MEDAGQ5VYS4 303 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 TPGS1Q6ZTW0 290 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 ZNF671Q8TAW3 534 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 RAB8BQ92930 207 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 NDRG2Q9UN36 371 aaKnown RBP12.48□□□□□ -0.41
TRIM35-201ENST00000305364 NEU3Q9UQ49 428 aa12.48□□□□□ -0.41
TRIM35-201ENST00000305364 COL11A1P12107 1806 aaPredicted RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 MBLAC1A4D2B0 266 aaPredicted RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 A8MUA0 341 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 SCAMP2O15127 329 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 IL1AP01583 271 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 RHCEP18577 417 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 HOXD9P28356 352 aaPredicted RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 SSTR2P30874 369 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 RPL3P39023 403 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 RFX2P48378 723 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 RPS13P62277 151 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 OR2G6Q5TZ20 316 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 TMIGD1Q6UXZ0 262 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 THOC6Q86W42 341 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 PTOV1Q86YD1 416 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 SMG7Q92540 1137 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 PIGKQ92643 395 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 NARS2Q96I59 477 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 FCRL4Q96PJ5 515 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 ZDHHC6Q9H6R6 413 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 ASAH2Q9NR71 780 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 ACOXLQ9NUZ1 547 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 PCDHGA2Q9Y5H1 932 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 A0A1B0GVC2 190 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 A6NIN4 97 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 HLA-DPB1P04440 258 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 DNASE1P24855 282 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 ACRV1P26436 265 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 EVI2BP34910 448 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 RPS26P62854 115 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 HSPB3Q12988 150 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 PAQR6Q6TCH4 344 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 LIMS2Q7Z4I7 341 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 DEFB128Q7Z7B8 93 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 NLRP8Q86W28 1048 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 OR52P1PQ8NH57 321 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 USP7Q93009 1102 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 OPALINQ96PE5 141 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 MCCC1Q96RQ3 725 aaPredicted RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 RANBP3Q9H6Z4 567 aaPredicted RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 FOLH1BQ9HBA9 442 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 LTBP1Q14766 1721 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 SSC5DA1L4H1 1573 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 ARHGEF33A8MVX0 844 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 FZD9O00144 591 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 SMAD3P84022 425 aaKnown RBP12.47□□□□□ -0.41
TRIM35-201ENST00000305364 SP3Q02447 781 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 MIA3Q5JRA6 1907 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 MED27Q6P2C8 311 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 NUDT18Q6ZVK8 323 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 TOR1AIP2Q8NFQ8 470 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 NARFLQ9H6Q4 476 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 IL26Q9NPH9 171 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 UBQLN2Q9UHD9 624 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 MGAT4BQ9UQ53 548 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 TRAPPC4Q9Y296 219 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 PADI2Q9Y2J8 665 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 SNX11Q9Y5W9 270 aa12.47□□□□□ -0.41
TRIM35-201ENST00000305364 LOC105369274A0A096LPK9 316 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 C2orf78A6NCI8 922 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 DRGXA6NNA5 263 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 EEF1E1O43324 174 aaKnown RBP12.46□□□□□ -0.41
TRIM35-201ENST00000305364 CKMP06732 381 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 OSMP13725 252 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 JUPP14923 745 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 LHCGRP22888 699 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 DGKGP49619 791 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 ST8SIA6P61647 398 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 AP1S1P61966 158 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 NOGQ13253 232 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 TRIM71Q2Q1W2 868 aaKnown RBP12.46□□□□□ -0.41
TRIM35-201ENST00000305364 BPHLQ86WA6 291 aaPredicted RBP12.46□□□□□ -0.41
TRIM35-201ENST00000305364 OR4N4Q8N0Y3 316 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 NPLOC4Q8TAT6 608 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 FBLIM1Q8WUP2 373 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 CDCA4Q9BXL8 241 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 TTYH1Q9H313 450 aaPredicted RBP12.46□□□□□ -0.41
TRIM35-201ENST00000305364 OR51B5Q9H339 312 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 DPAGT1Q9H3H5 408 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 ZDHHC3Q9NYG2 299 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 POLHQ9Y253 713 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 IRGMA1A4Y4 181 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 CD8B2A6NJW9 211 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 NUPL2O15504 423 aaKnown RBP12.46□□□□□ -0.41
TRIM35-201ENST00000305364 SEPT4O43236 478 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 LRG1P02750 347 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 CD8BP10966 210 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 PRKACAP17612 351 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 PLD1Q13393 1074 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 DOC2AQ14183 400 aa12.46□□□□□ -0.41
TRIM35-201ENST00000305364 LRRC32Q14392 662 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms