RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 ATP1A1-AS1Q5TC04 95 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 ADAMTS17Q8TE56 1095 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 TANKQ92844 425 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 FCRL1Q96LA6 429 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 C1orf50Q9BV19 199 aa23.01■■□□□ 1.27
HOXC9-201ENST00000303450 PCDH17O14917 1159 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 VIMP08670 466 aaKnown RBP23■■□□□ 1.27
HOXC9-201ENST00000303450 IL3P08700 152 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 EPHA3P29320 983 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 VAC14Q08AM6 782 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 CDC20Q12834 499 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 MAVSQ7Z434 540 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 PPP1R32Q7Z5V6 425 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 CLNKQ7Z7G1 428 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 SCUBE1Q8IWY4 988 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 TMEM132CQ8N3T6 1108 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 TSLPQ969D9 159 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 IP6K3Q96PC2 410 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 WDR55Q9H6Y2 383 aaPredicted RBP23■■□□□ 1.27
HOXC9-201ENST00000303450 C19orf25Q9UFG5 118 aaPredicted RBP23■■□□□ 1.27
HOXC9-201ENST00000303450 HS3ST3B1Q9Y662 390 aa23■■□□□ 1.27
HOXC9-201ENST00000303450 GOLGA8QA0A0J9YX86 632 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 C1orf226A1L170 272 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 GOLGA8OA6NCC3 632 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 GOLGA8NF8WBI6 632 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 K7ENP7 123 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 PEX12O00623 359 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 ZNF195O14628 629 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 DIAPH2O60879 1101 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 LDB3O75112 727 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 TGDSO95455 350 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 FURINP09958 794 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 LBPP18428 481 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 PPP2R1BP30154 601 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 EMX2Q04743 252 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 STX4Q12846 297 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 HEPACAMQ14CZ8 416 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 SMU1Q2TAY7 513 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 OR52E8Q6IFG1 317 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 INO80CQ6PI98 192 aaPredicted RBP22.99■■□□□ 1.27
HOXC9-201ENST00000303450 TMEM205Q6UW68 189 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 RIPOR1Q6ZS17 1223 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 MRGPREQ86SM8 312 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 VPS50Q96JG6 964 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 NECTIN3Q9NQS3 549 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 EIF3LQ9Y262 564 aaKnown RBP22.99■■□□□ 1.27
HOXC9-201ENST00000303450 WBP11Q9Y2W2 641 aaKnown RBP22.99■■□□□ 1.27
HOXC9-201ENST00000303450 PCDHA9Q9Y5H5 950 aa22.99■■□□□ 1.27
HOXC9-201ENST00000303450 PGRMC2O15173 223 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 PRR35P0CG20 571 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 BCKDHAP12694 445 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 ACPPP15309 386 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 SDC1P18827 310 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 TACR1P25103 407 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 ALDH9A1P49189 494 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 ERVK-8P63133 956 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 SLC9B1Q4ZJI4 515 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 IL23RQ5VWK5 629 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 NXNQ6DKJ4 435 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 LANCL3Q6ZV70 420 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 LARP4Q71RC2 724 aaKnown RBP eCLIP22.98■■□□□ 1.274e-6■■□□□ 12.8
HOXC9-201ENST00000303450 LRRC34Q8IZ02 419 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 THAP4Q8WY91 577 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 C8orf44Q96CB5 159 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 MYNNQ9NPC7 610 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 PTPRQQ9UMZ3 2332 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 IGKV3D-11A0A0A0MRZ8 115 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 SOCS6O14544 535 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 DRD2P14416 443 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 GYS2P54840 703 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 AQP5P55064 265 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 CXADRP78310 365 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 C2orf80Q0P641 193 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 ST3GAL2Q16842 350 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 EPGNQ6UW88 154 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 KIRREL2Q6UWL6 708 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 ANKRD37Q7Z713 158 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 OR4N5Q8IXE1 308 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 PARP9Q8IXQ6 854 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 MMP21Q8N119 569 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 LIX1Q8N485 282 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 UCN3Q969E3 161 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 TSSK3Q96PN8 268 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 MESP1Q9BRJ9 268 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 FGFR1OP2Q9NVK5 253 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 P4HTMQ9NXG6 502 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 NOP53Q9NZM5 478 aaKnown RBP22.98■■□□□ 1.27
HOXC9-201ENST00000303450 BAIAP2L1Q9UHR4 511 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 POLHQ9Y253 713 aa22.98■■□□□ 1.27
HOXC9-201ENST00000303450 WASHC1A8K0Z3 465 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 FGF17O60258 216 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 PRPS2P11908 318 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 ALOX15P16050 662 aaPredicted RBP22.97■■□□□ 1.27
HOXC9-201ENST00000303450 ID2Q02363 134 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 FOLH1Q04609 750 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 EEF1A2Q05639 463 aaKnown RBP22.97■■□□□ 1.27
HOXC9-201ENST00000303450 ATP1A4Q13733 1029 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 IKBIPQ70UQ0 350 aa22.97■■□□□ 1.27
HOXC9-201ENST00000303450 CPEB2Q7Z5Q1 589 aaKnown RBP22.97■■□□□ 1.27
HOXC9-201ENST00000303450 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms