RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 SOCS2O14508 198 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 ZSCAN9O15535 394 aaPredicted RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 DPM1O60762 260 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 CTSVO60911 334 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 HPRP00739 348 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 C1QCP02747 245 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 DCNP07585 359 aaKnown RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 SP9P0CG40 484 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 ARAFP10398 606 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 CKMT2P17540 419 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 ZNF10P21506 573 aaPredicted RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 NTSP30990 170 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 RXRGP48443 463 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 HNRNPKP61978 463 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM3-202ENST00000302206 TXNL4AP83876 142 aaKnown RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 EEF1A2Q05639 463 aaKnown RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 C1orf61Q13536 156 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 SUZ12Q15022 739 aaKnown RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 PDK3Q15120 406 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 CEBPEQ15744 281 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 NKG7Q16617 165 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.37□□□□□ -0.59
TPM3-202ENST00000302206 ARMC6Q6NXE6 501 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 OGFOD3Q6PK18 319 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 TMEM64Q6YI46 380 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 PIWIL3Q7Z3Z3 882 aaKnown RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 TRIM73Q86UV7 250 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 SVOPLQ8N434 492 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 CBR4Q8N4T8 237 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 ZNF655Q8N720 491 aaPredicted RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 AMER3Q8N944 861 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 OR8K5Q8NH50 307 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 PNPT1Q8TCS8 783 aaKnown RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 SFXN5Q8TD22 340 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 UTP15Q8TED0 518 aaKnown RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 MOAP1Q96BY2 351 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 HSPA12BQ96MM6 686 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 SERINC2Q96SA4 455 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 DPH2Q9BQC3 489 aaPredicted RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 SEMA6CQ9H3T2 930 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 CXorf36Q9H7Y0 433 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 SYNPO2LQ9H987 977 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 NTN4Q9HB63 628 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 SLAMF7Q9NQ25 335 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 THUMPD1Q9NXG2 353 aaKnown RBP11.37□□□□□ -0.59
TPM3-202ENST00000302206 PHF11Q9UIL8 331 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 CES1P1Q9UKY3 287 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 OAZ3Q9UMX2 235 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 ZNF451Q9Y4E5 1061 aa11.37□□□□□ -0.59
TPM3-202ENST00000302206 RNF103-CHMP3A0A140T963 221 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 LMO7DNF2Z398 122 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 TXNDC9O14530 226 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 PPM1DO15297 605 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 PROM1O43490 865 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 NOBOXO60393 691 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 IFNA14P01570 189 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 NTRK1P04629 796 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 LYNP07948 512 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 ETFAP13804 333 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 CERS1P27544 350 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 SOAT1P35610 550 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 CRATP43155 626 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 PXNP49023 591 aaPredicted RBP11.36□□□□□ -0.59
TPM3-202ENST00000302206 PRIM2P49643 509 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 GTF2A1P52655 376 aaPredicted RBP11.36□□□□□ -0.59
TPM3-202ENST00000302206 FOXK1P85037 733 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 NRF1Q16656 503 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 NHSL2Q5HYW2 709 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 WDR45BQ5MNZ6 344 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 COX20Q5RI15 118 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 SLC48A1Q6P1K1 146 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 UGT2A3Q6UWM9 527 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 ABHD13Q7L211 337 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 C1orf210Q8IVY1 113 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 SAMD14Q8IZD0 417 aaPredicted RBP11.36□□□□□ -0.59
TPM3-202ENST00000302206 METTL25Q8N6Q8 603 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 LMX1AQ8TE12 382 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 RERGQ96A58 199 aaPredicted RBP11.36□□□□□ -0.59
TPM3-202ENST00000302206 EXOSC8Q96B26 276 aaKnown RBP11.36□□□□□ -0.59
TPM3-202ENST00000302206 RDH12Q96NR8 316 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 AMDHD1Q96NU7 426 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 OSBPL10Q9BXB5 764 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 ERVMER34-1Q9H9K5 563 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 A4GALTQ9NPC4 353 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 IL1RAPQ9NPH3 570 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 SEMA3GQ9NS98 782 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 SIRT3Q9NTG7 399 aaPredicted RBP11.36□□□□□ -0.59
TPM3-202ENST00000302206 GIMAP4Q9NUV9 329 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 ADPRHL2Q9NX46 363 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 UTS2RQ9UKP6 389 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 CDV3Q9UKY7 258 aaKnown RBP11.36□□□□□ -0.59
TPM3-202ENST00000302206 PSME2Q9UL46 239 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 ATG4BQ9Y4P1 393 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 V9GYQ6 96 aa11.36□□□□□ -0.59
TPM3-202ENST00000302206 CHD6Q8TD26 2715 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 CFAP47Q6ZTR5 3102 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 A0A0G2JN53 185 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 B4DGG1 531 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 AQP9O43315 295 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms