RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 C17orf62Q9BQA9 187 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 ACAT2Q9BWD1 397 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 ACPTQ9BZG2 426 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 SIRT5Q9NXA8 310 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 ZIM2Q9NZV7 527 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 VPS29Q9UBQ0 182 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 POMT2Q9UKY4 750 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 MAPRE3Q9UPY8 281 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 SH2B3Q9UQQ2 575 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 OSGIN2Q9Y236 505 aa19.88■□□□□ 0.77
SMCO4-201ENST00000298966 ANKDD1BA6NHY2 528 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 PRSS44E7EML9 344 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 PSMD12O00232 456 aaPredicted RBP19.87■□□□□ 0.77
SMCO4-201ENST00000298966 MYO1DO94832 1006 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 ALDOCP09972 364 aaKnown RBP19.87■□□□□ 0.77
SMCO4-201ENST00000298966 PCNAP12004 261 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 COX4I1P13073 169 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 CSNK1G2P78368 415 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 SSPNQ14714 243 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 SPIN4Q56A73 249 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 FAM219BQ5XKK7 198 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 SCIMPQ6UWF3 145 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 HUS1BQ8NHY5 278 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 BTBD10Q9BSF8 475 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 C1orf21Q9H246 121 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 FARSBQ9NSD9 589 aaKnown RBP19.87■□□□□ 0.77
SMCO4-201ENST00000298966 GPR45Q9Y5Y3 372 aa19.87■□□□□ 0.77
SMCO4-201ENST00000298966 SNRNP200O75643 2136 aaKnown RBP19.87■□□□□ 0.77
SMCO4-201ENST00000298966 BTN3A3O00478 584 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 ZG16O60844 167 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 SEC22BO75396 215 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 SEMA3DO95025 777 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 MSL3P1P0C860 447 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 PTX3P26022 381 aaPredicted RBP19.86■□□□□ 0.77
SMCO4-201ENST00000298966 PEBP1P30086 187 aaKnown RBP19.86■□□□□ 0.77
SMCO4-201ENST00000298966 AHRP35869 848 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 ARFIP1P53367 373 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 RPL38P63173 70 aaKnown RBP19.86■□□□□ 0.77
SMCO4-201ENST00000298966 CUL3Q13618 768 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 MLIPQ5VWP3 458 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 ZNF425Q6IV72 752 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 ZUFSPQ96AP4 578 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 THAP11Q96EK4 314 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 MARK4Q96L34 752 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 FCRL1Q96LA6 429 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 CENPKQ9BS16 269 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 DMRT3Q9NQL9 472 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 SDAD1Q9NVU7 687 aaKnown RBP eCLIP19.86■□□□□ 0.77
SMCO4-201ENST00000298966 ACTR10Q9NZ32 417 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 AHSPQ9NZD4 102 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 GPN3Q9UHW5 284 aaPredicted RBP19.86■□□□□ 0.77
SMCO4-201ENST00000298966 RUVBL1Q9Y265 456 aaKnown RBP19.86■□□□□ 0.77
SMCO4-201ENST00000298966 PTRH2Q9Y3E5 179 aaKnown RBP19.86■□□□□ 0.77
SMCO4-201ENST00000298966 FER1L5A0AVI2 2057 aa19.86■□□□□ 0.77
SMCO4-201ENST00000298966 GSAPA4D1B5 854 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 H7BY64 318 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 ZNF749O43361 778 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 CLEC3AO75596 197 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 KLF7O75840 302 aaPredicted RBP19.85■□□□□ 0.77
SMCO4-201ENST00000298966 ITGA3P26006 1051 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 PSMB5P28074 263 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 FOLR3P41439 243 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 NEK2P51955 445 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 HMGCS1Q01581 520 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 STX5Q13190 355 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 KIAA0040Q15053 153 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 PIAS4Q8N2W9 510 aaPredicted RBP19.85■□□□□ 0.77
SMCO4-201ENST00000298966 GLB1L3Q8NCI6 653 aaPredicted RBP19.85■□□□□ 0.77
SMCO4-201ENST00000298966 MTFMTQ96DP5 389 aaKnown RBP19.85■□□□□ 0.77
SMCO4-201ENST00000298966 PRAP1Q96NZ9 151 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 RAB3IPQ96QF0 476 aaPredicted RBP19.85■□□□□ 0.77
SMCO4-201ENST00000298966 HBEGFQ99075 208 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 WDR77Q9BQA1 342 aaPredicted RBP19.85■□□□□ 0.77
SMCO4-201ENST00000298966 P4HTMQ9NXG6 502 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 NDE1Q9NXR1 346 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 SPHK1Q9NYA1 384 aa19.85■□□□□ 0.77
SMCO4-201ENST00000298966 PDZD2O15018 2839 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 BBIP1A8MTZ0 92 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 MAGEB17A8MXT2 336 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 B2RBV5 119 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 CD63P08962 238 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 NQO1P15559 274 aaKnown RBP19.84■□□□□ 0.77
SMCO4-201ENST00000298966 UGT2B7P16662 529 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 SOX8P57073 446 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 RPS15AP62244 130 aaKnown RBP19.84■□□□□ 0.77
SMCO4-201ENST00000298966 ACSM2AQ08AH3 577 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 CYLC2Q14093 348 aaPredicted RBP19.84■□□□□ 0.77
SMCO4-201ENST00000298966 RBBP5Q15291 538 aaKnown RBP19.84■□□□□ 0.77
SMCO4-201ENST00000298966 DNAL1Q4LDG9 190 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 IL23RQ5VWK5 629 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 ZNF385CQ66K41 422 aaPredicted RBP19.84■□□□□ 0.77
SMCO4-201ENST00000298966 ACSM2BQ68CK6 577 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 SPESP1Q6UW49 350 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 RINLQ6ZS11 566 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 ADCK2Q7Z695 626 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 GPR135Q8IZ08 494 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 TRPV3Q8NET8 790 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 FLVCR1-AS1Q8TAF5 88 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 OR2A14Q96R47 310 aa19.84■□□□□ 0.77
SMCO4-201ENST00000298966 MTERF1Q99551 399 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms