RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 REPS1Q96D71 796 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 TMEM19Q96HH6 336 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 SNTG1Q9NSN8 517 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 ASF1AQ9Y294 204 aa23.23■■□□□ 1.31
SPTSSA-201ENST00000298130 HIDE1A8MVS5 230 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 C5orf58C9J3I9 102 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 MMP20O60882 483 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 B4GALT2O60909 372 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 IRS1P35568 1242 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 PCYT1AP49585 367 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 TCEAL5Q5H9L2 206 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 TMEM203Q969S6 136 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 OPALINQ96PE5 141 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 ISPDA4D126 451 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 SAGE2PA6NJ88 616 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 PSMB5P28074 263 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 RBBP4Q09028 425 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 NOGQ13253 232 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 FBXO43Q4G163 708 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 PLAG1Q6DJT9 500 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 DPPA4Q7L190 304 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 GPR65Q8IYL9 337 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 NEDD4LQ96PU5 975 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 NLNQ9BYT8 704 aa23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 GPBP1L1Q9HC44 474 aaPredicted RBP23.22■■□□□ 1.31
SPTSSA-201ENST00000298130 TLR4O00206 839 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 CCRL2O00421 344 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 PPM1DO15297 605 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 ASNA1O43681 348 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 POP7O75817 140 aaKnown RBP23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 LAG3P18627 525 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 LIMK1P53667 647 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 MANFP55145 182 aaKnown RBP23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF45Q02386 682 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 PIN1Q13526 163 aaPredicted RBP23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 TMIGD1Q6UXZ0 262 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 C11orf96Q7Z7L8 435 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 TCEANCQ8N8B7 351 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 EFCAB11Q9BUY7 163 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 ANKHQ9HCJ1 492 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 HHATLQ9HCP6 504 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 MYNNQ9NPC7 610 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 CCDC177Q9NQR7 707 aaPredicted RBP23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 CUEDC1Q9NWM3 386 aaPredicted RBP23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 FBXL12Q9NXK8 326 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 PCSK2P16519 638 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 RHCEP18577 417 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 PRKCDQ05655 676 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 BCL7AQ4VC05 210 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 ZNF770Q6IQ21 691 aaPredicted RBP23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 COMTD1Q86VU5 262 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 NLRP8Q86W28 1048 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 LAS2Q8IYD9 372 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 GPR151Q8TDV0 419 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 METTL2AQ96IZ6 378 aaKnown RBP23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 CAPNS2Q96L46 248 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 ASPNQ9BXN1 380 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 BARHL1Q9BZE3 327 aa23.21■■□□□ 1.31
SPTSSA-201ENST00000298130 ALPK3Q96L96 1907 aa23.2■■□□□ 1.31
SPTSSA-201ENST00000298130 PLPP1O14494 284 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 TBX6O95947 436 aaPredicted RBP23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 ITGB8P26012 769 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 TNFSF8P32971 234 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 SOX6P35712 828 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 CASP3P42574 277 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 GPR1P46091 355 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 PNLIPRP1P54315 467 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 NXNL2Q5VZ03 156 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 REEP3Q6NUK4 255 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 CNKSR3Q6P9H4 555 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 ZNF367Q7RTV3 350 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 OR5D16Q8NGK9 328 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 MVB12BQ9H7P6 319 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 TM7SF3Q9NS93 570 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 CCDC59Q9P031 241 aaKnown RBP23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 MUTYHQ9UIF7 546 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 PEX16Q9Y5Y5 336 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 MOSPD3O75425 235 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 ALPPL2P10696 532 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 TAB1Q15750 504 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 SPDYE7PQ495Y7 208 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 TCTN3Q6NUS6 607 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 CCDC80Q76M96 950 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 C12orf40Q86WS4 652 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 SFTPA1Q8IWL2 248 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 AMER3Q8N944 861 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 SGPP1Q9BX95 441 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 ZBP1Q9H171 429 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 TAC3Q9UHF0 121 aa23.2■■□□□ 1.3
SPTSSA-201ENST00000298130 FOXE1O00358 373 aaPredicted RBP23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 SPINT1O43278 529 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 KRT75O95678 551 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 SERPIND1P05546 499 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 TCEA1P23193 301 aaKnown RBP23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 ERAP2Q6P179 960 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 LILRA6Q6PI73 481 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 LRRC56Q8IYG6 542 aaPredicted RBP23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 SLAIN1Q8ND83 568 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 CRELD1Q96HD1 420 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 TXNDC15Q96J42 360 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms