RNA–Protein interactions for RNA: ENST00000297071.8

TRA2A-201, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRA2A, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-201ENST00000297071 ACAD8Q9UKU7 415 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 HCN2Q9UL51 889 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 KCNE2Q9Y6J6 123 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 A6NL46 340 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 GKP32189 559 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 DSTNP60981 165 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 RPS13P62277 151 aaKnown RBP18.28■□□□□ 0.52
TRA2A-201ENST00000297071 RACK1P63244 317 aaKnown RBP18.28■□□□□ 0.52
TRA2A-201ENST00000297071 COX10Q12887 443 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 DUSP6Q16828 381 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 PDZK1Q5T2W1 519 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 PPP2R2DQ66LE6 453 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 FAM131AQ6UXB0 335 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 CASP12Q6UXS9 341 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 RAVER1Q8IY67 606 aaKnown RBP18.28■□□□□ 0.52
TRA2A-201ENST00000297071 PLA2G15Q8NCC3 412 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 DUSP18Q8NEJ0 188 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 SOSTQ9BQB4 213 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 FUZQ9BT04 418 aa18.28■□□□□ 0.52
TRA2A-201ENST00000297071 PLEKHB1Q9UF11 243 aaPredicted RBP18.28■□□□□ 0.52
TRA2A-201ENST00000297071 PCNTO95613 3336 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 FABP12A6NFH5 140 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 H3BM21 787 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 M0R129 80 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 MYL12BO14950 172 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 OR1D2P34982 312 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 CHI3L1P36222 383 aaPredicted RBP18.27■□□□□ 0.52
TRA2A-201ENST00000297071 LMAN2Q12907 356 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 TP53BP2Q13625 1128 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 TPBGQ13641 420 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 VEPH1Q14D04 833 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 QPRTQ15274 297 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 MPPE1Q53F39 396 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 ZNF628Q5EBL2 1059 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 ZMAT1Q5H9K5 638 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 C3orf38Q5JPI3 329 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 ANGPTL8Q6UXH0 198 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 C16orf78Q8WTQ4 265 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 JPH3Q8WXH2 748 aaPredicted RBP18.27■□□□□ 0.52
TRA2A-201ENST00000297071 C11orf54Q9H0W9 315 aaPredicted RBP18.27■□□□□ 0.52
TRA2A-201ENST00000297071 ABCB9Q9NP78 766 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 HS3ST2Q9Y278 367 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 PCDHGB7Q9Y5F8 929 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 SNX11Q9Y5W9 270 aa18.27■□□□□ 0.52
TRA2A-201ENST00000297071 NPC1O15118 1278 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 RAB36O95755 333 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 SRCP12931 536 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 POU2F1P14859 743 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 IMPA1P29218 277 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 SOX3P41225 446 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 GSTM5P46439 218 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 POLR2LP62875 67 aaKnown RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 PPP3R1P63098 170 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 PLD1Q13393 1074 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 HEPACAMQ14CZ8 416 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 SLC5A12Q1EHB4 618 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 TRIM60Q495X7 471 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 PLK5Q496M5 336 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 DCST1Q5T197 706 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 LCN1P1Q5VSP4 162 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 SERPINA13PQ6UXR4 307 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 NPAS4Q8IUM7 802 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 VANGL1Q8TAA9 524 aaPredicted RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 ZNF461Q8TAF7 563 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 TRMT61AQ96FX7 289 aaKnown RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 SLC6A18Q96N87 628 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 TSSK6Q9BXA6 273 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 ANKRA2Q9H9E1 313 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 FGF20Q9NP95 211 aaPredicted RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 TIGARQ9NQ88 270 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 TESQ9UGI8 421 aaKnown RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 MBD1Q9UIS9 605 aaPredicted RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 GABRQQ9UN88 632 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 YIPF1Q9Y548 306 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 TMEM129A0AVI4 362 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 PITPNM1O00562 1244 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 FFAR1O14842 300 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 CDRT1O95170 752 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 POP4O95707 220 aaKnown RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 C1QBP02746 253 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 ELAVL4P26378 380 aaKnown RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 FGF9P31371 208 aaPredicted RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 GZMKP49863 264 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 XKP51811 444 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 RAB25P57735 213 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 PUM1Q14671 1186 aaKnown RBP eCLIP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 SEC23BQ15437 767 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 SF1Q15637 639 aaKnown RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 TAF12Q16514 161 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 MPEG1Q2M385 716 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 KLHL22Q53GT1 634 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 CCNJQ5T5M9 372 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 SAXO2Q658L1 398 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 MZT2BQ6NZ67 158 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 ZNF767PQ75MW2 155 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 COMMD6Q7Z4G1 85 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 LRRC56Q8IYG6 542 aaPredicted RBP18.26■□□□□ 0.51
TRA2A-201ENST00000297071 OR4K1Q8NGD4 311 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 LMLNQ96KR4 655 aa18.26■□□□□ 0.51
TRA2A-201ENST00000297071 KCTD7Q96MP8 289 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms