RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 HS3ST2Q9Y278 367 aa13.71□□□□□ -0.22
TMEM47-201ENST00000275954 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 PLOD3O60568 738 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 TNFRSF21O75509 655 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 TCEA1P23193 301 aaKnown RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 CSTF2P33240 577 aaKnown RBP eCLIP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 COX10Q12887 443 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 NHSL2Q5HYW2 709 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 SHQ1Q6PI26 577 aaKnown RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 RDH12Q96NR8 316 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 SAMD11Q96NU1 681 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 MYADMQ96S97 322 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 SLC2A11Q9BYW1 496 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 TMEM27Q9HBJ8 222 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 GPR83Q9NYM4 423 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 IL20RAQ9UHF4 553 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 MRPS33Q9Y291 106 aaKnown RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 SPTBP11277 2137 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 FAM86C2PA6NEL3 165 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 H7C0S8 307 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 B3GALT2O43825 422 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 CDC123O75794 336 aaPredicted RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 OR5F1O95221 314 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 PCSK6P29122 969 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 HSDL2Q6YN16 418 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 BARD1Q99728 777 aaKnown RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 FOXQ1Q9C009 403 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 SPRTNQ9H040 489 aaPredicted RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 DZANK1Q9NVP4 752 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 BTN3A3O00478 584 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 SLC30A4O14863 429 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 HCN1O60741 890 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 OR6A2O95222 327 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 CYP17A1P05093 508 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 RETP07949 1114 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 PIM1P11309 404 aaPredicted RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 SUOXP51687 545 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 RPL6Q02878 288 aaKnown RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 KCNC4Q03721 635 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 IHHQ14623 411 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 CEP78Q5JTW2 689 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 GRHL2Q6ISB3 625 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 METTL25Q8N6Q8 603 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 MFSD2AQ8NA29 543 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 ZNF548Q8NEK5 533 aaPredicted RBP13.7□□□□□ -0.22
TMEM47-201ENST00000275954 LGALS12Q96DT0 336 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 GAL3ST4Q96RP7 486 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 TMEM9Q9P0T7 183 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 STON1Q9Y6Q2 735 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
TMEM47-201ENST00000275954 A8MUA0 341 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 HRH2P25021 359 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 HSD17B2P37059 387 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 CDK5R2Q13319 367 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 SLC14A2Q15849 920 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 MOGQ16653 247 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 HNRNPA1L2Q32P51 320 aaKnown RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 FAM160A2Q8N612 972 aaPredicted RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ZNF433Q8N7K0 673 aaPredicted RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 FATE1Q969F0 183 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 TSACCQ96A04 125 aaPredicted RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 SLCO4A1Q96BD0 722 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 TMEM19Q96HH6 336 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 CPEB1Q9BZB8 566 aaKnown RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 NKIRAS2Q9NYR9 191 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 CEPT1Q9Y6K0 416 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 FOCADQ5VW36 1801 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 FAM92AA1XBS5 289 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ANTXRLA6NF34 631 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ANHXE9PGG2 379 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 H3BMQ9 156 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 HAT1O14929 419 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 FRS3O43559 492 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ATE1O95260 518 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 HSD3B1P14060 373 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 HSD3B2P26439 372 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 HBA1P69905 142 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 CAMK1Q14012 370 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 GINS1Q14691 196 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 CST6Q15828 149 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 KLHL6Q8WZ60 621 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 COG8Q96MW5 612 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 IFT27Q9BW83 186 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 NPLQ9BXD5 320 aaPredicted RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 TMEM121BQ9BXQ6 578 aaPredicted RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 P2RY12Q9H244 342 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 UNC13CQ8NB66 2214 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 B4GALT2O60909 372 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 C7P10643 843 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ZNF12P17014 697 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 NNATQ16517 81 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 FOXB2Q5VYV0 432 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ADNP2Q6IQ32 1131 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ZNF420Q8TAQ5 688 aaPredicted RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 ISG20Q96AZ6 181 aaKnown RBP13.69□□□□□ -0.22
TMEM47-201ENST00000275954 TSSK6Q9BXA6 273 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 TTTY10Q9BZA0 68 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 IKZF5Q9H5V7 419 aa13.69□□□□□ -0.22
TMEM47-201ENST00000275954 RPL36Q9Y3U8 105 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms