RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 HMGB4Q8WW32 186 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 C12orf66Q96MD2 445 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 SPRTNQ9H040 489 aaPredicted RBP12.26□□□□□ -0.45
HERC6-202ENST00000273960 ABCG5Q9H222 651 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 SEC14L4Q9UDX3 406 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 SAP18O00422 153 aaKnown RBP12.26□□□□□ -0.45
HERC6-202ENST00000273960 EEF1E1O43324 174 aaKnown RBP12.26□□□□□ -0.45
HERC6-202ENST00000273960 SCG5P05408 212 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 CFL1P23528 166 aaKnown RBP12.26□□□□□ -0.45
HERC6-202ENST00000273960 PTPN6P29350 595 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 HTR7P34969 479 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 SOX18P35713 384 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 CD79BP40259 229 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 ERVK-21P61565 698 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 CTXN3Q4LDR2 81 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 IDNKQ5T6J7 187 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 ALKAL1Q6UXT8 129 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 UNC5DQ6UXZ4 953 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 SZRD1Q7Z422 152 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 BOLLQ8N9W6 283 aaKnown RBP12.26□□□□□ -0.45
HERC6-202ENST00000273960 TM9SF4Q92544 642 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 PGAP3Q96FM1 320 aaPredicted RBP12.26□□□□□ -0.45
HERC6-202ENST00000273960 KCTD7Q96MP8 289 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 KATNB1Q9BVA0 655 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 POFUT2Q9Y2G5 429 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 PRSS21Q9Y6M0 314 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 CKAP5Q14008 2032 aa12.26□□□□□ -0.45
HERC6-202ENST00000273960 GABRR3A8MPY1 467 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 MTRF1O75570 445 aaKnown RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 MPC2O95563 127 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 RAF1P04049 648 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 IRF1P10914 325 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 TALDO1P37837 337 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 HSPA14Q0VDF9 509 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 DUOXA1Q1HG43 343 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 TRIM71Q2Q1W2 868 aaKnown RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 MS4A13Q5J8X5 152 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 CXorf57Q6NSI4 855 aaKnown RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 CASP12Q6UXS9 341 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 USP45Q70EL2 814 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 TSEN54Q7Z6J9 526 aaKnown RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 SCD5Q86SK9 330 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 KLHDC9Q8NEP7 349 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 OR11H7Q8NGC8 314 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 LHFPL5Q8TAF8 219 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 SLC5A11Q8WWX8 675 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 KLHL6Q8WZ60 621 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 SLC25A46Q96AG3 418 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 KCNN2Q9H2S1 579 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 HCN3Q9P1Z3 774 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 STOML2Q9UJZ1 356 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 ARID1AO14497 2285 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 GNG14A0A1W2PPG7 69 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 STK16O75716 305 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 LPOP22079 712 aaPredicted RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 SP3Q02447 781 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 LAPTM4BQ86VI4 370 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 TTC9BQ8N6N2 239 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 LMNTD1Q8N9Z9 388 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 ASZ1Q8WWH4 475 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 RBPMSQ93062 196 aaKnown RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 DOHHQ9BU89 302 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 CINPQ9BW66 212 aaPredicted RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 GABARAPL3Q9BY60 117 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 CD244Q9BZW8 370 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 WASH6PQ9NQA3 447 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 PCDHB9Q9Y5E1 797 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 SBF1O95248 1867 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 PARP14Q460N5 1801 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 TRBC1P01850 177 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 APOC3P02656 99 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 RPL17P18621 184 aaKnown RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 DNASE1P24855 282 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 GSTM5P46439 218 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 RPS26P62854 115 aaKnown RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 ZNF782Q6ZMW2 699 aaPredicted RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 DEF8Q6ZN54 512 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 C16orf59Q7L2K0 433 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 ADGRG2Q8IZP9 1017 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 DENND6BQ8NEG7 585 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 OR6M1Q8NGM8 313 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 ZFP3Q96NJ6 502 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 RTP3Q9BQQ7 232 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 NMNAT1Q9HAN9 279 aaPredicted RBP12.25□□□□□ -0.45
HERC6-202ENST00000273960 NANSQ9NR45 359 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 PLCXD1Q9NUJ7 323 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 TRPM5Q9NZQ8 1165 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 EXTL2Q9UBQ6 330 aa12.25□□□□□ -0.45
HERC6-202ENST00000273960 GRXCR2A6NFK2 248 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 LINC01387J3KSC0 135 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 CHP2O43745 196 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 PPM1BO75688 479 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 CLDN9O95484 217 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 ETV5P41161 510 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 TTPAP49638 278 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 ETV1P50549 477 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 KIAA1024LP59773 190 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 RPS7P62081 194 aaKnown RBP12.24□□□□□ -0.45
HERC6-202ENST00000273960 COX10Q12887 443 aa12.24□□□□□ -0.45
HERC6-202ENST00000273960 GAB1Q13480 694 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms