RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 CSNK1A1LQ8N752 337 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 SMIM10Q96HG1 83 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 PYURFQ96I23 114 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 AMDHD1Q96NU7 426 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 BBS4Q96RK4 519 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 SERINC2Q96SA4 455 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 CCDC3Q9BQI4 270 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 BDH2Q9BUT1 245 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 C9orf16Q9BUW7 83 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 RPS6KA6Q9UK32 745 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 PADI4Q9UM07 663 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 PDLIM1O00151 329 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 ZSCAN9O15535 394 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 NR2F6P10588 404 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 ZNF10P21506 573 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 AQP1P29972 269 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 GPC1P35052 558 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 HSPA13P48723 471 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 DHPSP49366 369 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 PRIM2P49643 509 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 VSX2P58304 361 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 COL9A2Q14055 689 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 DEFB110Q30KQ9 67 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 C14orf28Q4W4Y0 310 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 TMTC4Q5T4D3 741 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 INTS11Q5TA45 600 aaKnown RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 LYSMD4Q5XG99 296 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 SAXO2Q658L1 398 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 OGFOD3Q6PK18 319 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 CBR4Q8N4T8 237 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 C19orf47Q8N9M1 422 aaKnown RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 ZFP28Q8NHY6 868 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 KLHL6Q8WZ60 621 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 NEURL3Q96EH8 262 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 CNRIP1Q96F85 164 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 TMEM38AQ9H6F2 299 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 FAM60AQ9NP50 221 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 PRMT8Q9NR22 394 aaPredicted RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 C1GALT1Q9NS00 363 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 CES1P1Q9UKY3 287 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 ENTPD4Q9Y227 616 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 MRPS2Q9Y399 296 aaKnown RBP10.94□□□□□ -0.66
SCAF11-201ENST00000266589 CACNA1IQ9P0X4 2223 aa10.94□□□□□ -0.66
SCAF11-201ENST00000266589 USP34Q70CQ2 3546 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 TNRC6BQ9UPQ9 1833 aaKnown RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 SLC9B1P1A6NJY1 282 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 H0YJX3 145 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 HCRTR1O43613 425 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 B3GALT2O43825 422 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 C9P02748 559 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 ZNF23P17027 643 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 ALOX12P18054 663 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 CPN2P22792 545 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 BUD31P41223 144 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 RPS26P62854 115 aaKnown RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 TNFRSF17Q02223 184 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 RBBP4Q09028 425 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 SRSF5Q13243 272 aaKnown RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 MED21Q13503 144 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 SCARB2Q14108 478 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 SIM2Q14190 667 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 ZNF750Q32MQ0 723 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 PPP4R4Q6NUP7 873 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 TMEM214Q6NUQ4 689 aaKnown RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 FAM92BQ6ZTR7 304 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 CBLL1Q75N03 491 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 WDR5BQ86VZ2 330 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 NFKBIDQ8NI38 313 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 PSMA8Q8TAA3 256 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 ZNF597Q96LX8 424 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 MAP3K3Q99759 626 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 NTN4Q9HB63 628 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 PHF11Q9UIL8 331 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 RAB26Q9ULW5 256 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 AP4B1Q9Y6B7 739 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 A0A1B0GTW7 788 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 C7orf72A4D263 438 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 ZNF860A6NHJ4 632 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 RHPN2P1A8MT19 583 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 MYO1GB0I1T2 1018 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 ACOX3O15254 700 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 CST1P01037 141 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 C8orf89P0DMQ9 161 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 ALPPL2P10696 532 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 TDGF1P13385 188 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 HOXB6P17509 224 aaKnown RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 PTGER1P34995 402 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 FEN1P39748 380 aaKnown RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 CCT3P49368 545 aaKnown RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 LIM2P55344 173 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 DSTNP60981 165 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 OLR1P78380 273 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 DUSP2Q05923 314 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 BNIP3Q12983 259 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 TP53BP2Q13625 1128 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 RUNX2Q13950 521 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 SPIDRQ14159 915 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 ZNF630Q2M218 657 aaPredicted RBP10.93□□□□□ -0.66
SCAF11-201ENST00000266589 MANEAQ5SRI9 462 aa10.93□□□□□ -0.66
SCAF11-201ENST00000266589 C6orf52Q5T4I8 152 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms