RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZSCAN4Q8NAM6 433 aaPredicted RBP17.3■□□□□ 0.36
COL5A3-201ENST00000264828 TCEAL3Q969E4 200 aa17.3■□□□□ 0.36
COL5A3-201ENST00000264828 OR8D2Q9GZM6 311 aa17.3■□□□□ 0.36
COL5A3-201ENST00000264828 RGCCQ9H4X1 137 aa17.3■□□□□ 0.36
COL5A3-201ENST00000264828 AGAP5A6NIR3 686 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 F5H0A9 414 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 ANXA3P12429 323 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 POLR2CP19387 275 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 SCNN1AP37088 669 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 TEAD2Q15562 447 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 FAM189A2Q15884 450 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 CDNFQ49AH0 187 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 PSD4Q8NDX1 1056 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 UNC119BA6NIH7 251 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 PIGRP01833 764 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 TYRP14679 529 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 CTC1Q2NKJ3 1217 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 SLC36A3Q495N2 470 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 ZFP41Q8N8Y5 198 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 SCGB1C1Q8TD33 95 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 CPNE2Q96FN4 548 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 MAELQ96JY0 434 aaKnown RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 DPH2Q9BQC3 489 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 SEZ6LQ9BYH1 1024 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 MEAF6Q9HAF1 191 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 TMEM248Q9NWD8 314 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 EDARQ9UNE0 448 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 ZNF30P17039 623 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 NR4A2P43354 598 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 POU6F2P78424 691 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 WDR20Q8TBZ3 569 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 DOK4Q8TEW6 326 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 AP1S3Q96PC3 154 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 PAQR5Q9NXK6 330 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 GMEB2Q9UKD1 530 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 KIAA0513O60268 411 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 CCL5P13501 91 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 MAP2K3P46734 347 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 GLT8D1Q68CQ7 371 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 LAS2Q8IYD9 372 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 SIGLEC10Q96LC7 697 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 SMOQ99835 787 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 PEX13Q92968 403 aa17.29■□□□□ 0.36
COL5A3-201ENST00000264828 C11orf84Q9BUA3 381 aaPredicted RBP17.29■□□□□ 0.36
COL5A3-201ENST00000264828 CLEC3AO75596 197 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 RFPL1O75677 317 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 H2AFB2P0C5Z0 115 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 NKX2-5P52952 324 aaPredicted RBP17.28■□□□□ 0.36
COL5A3-201ENST00000264828 GRIK2Q13002 908 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 ITPRIPL2Q3MIP1 535 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 C6orf136Q5SQH8 315 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 C3orf33Q6P1S2 294 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 C14orf80Q86SX3 495 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 THAP4Q8WY91 577 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 SECISBP2Q96T21 854 aaKnown RBP17.28■□□□□ 0.36
COL5A3-201ENST00000264828 TSNAXQ99598 290 aaKnown RBP17.28■□□□□ 0.36
COL5A3-201ENST00000264828 ACTL8Q9H568 366 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 ASB3Q9Y575 518 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 NFS1Q9Y697 457 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 TVP23AA6NH52 213 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 SOCS2O14508 198 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 PLATP00750 562 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 CHRNA1P02708 482 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 MSL3P1P0C860 447 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 ERP29P30040 261 aaKnown RBP17.28■□□□□ 0.36
COL5A3-201ENST00000264828 GABRA3P34903 492 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 PMS2P3Q13401 168 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 TSGA13Q96PP4 275 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 ATXN7L1Q9ULK2 861 aaPredicted RBP17.28■□□□□ 0.36
COL5A3-201ENST00000264828 PCDH17O14917 1159 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 PRAMEF11O60813 436 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 IL3P08700 152 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 DNAJB1P25685 340 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 MEDAGQ5VYS4 303 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 PIP5K1AQ99755 562 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 INPPL1O15357 1258 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 FARS2O95363 451 aaKnown RBP17.28■□□□□ 0.36
COL5A3-201ENST00000264828 HK3P52790 923 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 COL28A1Q2UY09 1125 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 LRIT3Q3SXY7 679 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 SPATS1Q496A3 300 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 NELL2Q99435 816 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 ZNF717Q9BY31 904 aaPredicted RBP17.28■□□□□ 0.36
COL5A3-201ENST00000264828 DHDHQ9UQ10 334 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 COL1A1P02452 1464 aaPredicted RBP17.28■□□□□ 0.36
COL5A3-201ENST00000264828 H0YAE9 185 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 RBBP9O75884 186 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 MT-ND2P03891 347 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 FHP07954 510 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 STSP08842 583 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 GKN3PP0CG01 181 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 PET100P0DJ07 73 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 CNKSR3Q6P9H4 555 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 DCUN1D3Q8IWE4 304 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 TMEM246Q9BRR3 403 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 KCNH6Q9H252 994 aa17.28■□□□□ 0.36
COL5A3-201ENST00000264828 TYROBPO43914 113 aa17.27■□□□□ 0.36
COL5A3-201ENST00000264828 MLLT6P55198 1093 aaPredicted RBP17.27■□□□□ 0.36
COL5A3-201ENST00000264828 SNU13P55769 128 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms