RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 DNM1P34Q6PK57 102 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 TMEM107Q6UX40 140 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 TUBA1AQ71U36 451 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 GNPDA2Q8TDQ7 276 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 FATE1Q969F0 183 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 ZIC5Q96T25 663 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 EHD1Q9H4M9 534 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 C8orf33Q9H7E9 229 aaPredicted RBP13.4□□□□□ -0.26
CDH3-201ENST00000264012 SP140LQ9H930 580 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 ZNF334Q9HCZ1 680 aaPredicted RBP13.4□□□□□ -0.26
CDH3-201ENST00000264012 GDE1Q9NZC3 331 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 HSFX1Q9UBD0 423 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 FAM221BA6H8Z2 402 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 FAAHO00519 579 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 GPR39O43194 453 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 ARHGEF15O94989 841 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 ETFAP13804 333 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 SLC14A2Q15849 920 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 NADSYN1Q6IA69 706 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 MSANTD1Q6ZTZ1 278 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 HMGN2P46Q86SG4 172 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 ACVR1CQ8NER5 493 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 OR7G3Q8NG95 312 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 FOXJ1Q92949 421 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 COQ8BQ96D53 544 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 PCDHGA7Q9Y5G6 932 aa13.4□□□□□ -0.26
CDH3-201ENST00000264012 MYOCOSA0A1B0GUC4 107 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ITGB7P26010 798 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 PRDX3P30048 256 aaKnown RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 ACSL1P33121 698 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 STARP49675 285 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 OR12D2P58182 307 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 SGCBQ16585 318 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ZNF829Q3KNS6 432 aaPredicted RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 OR52E8Q6IFG1 317 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 CGB2Q6NT52 195 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ENPP6Q6UWR7 440 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 KLHDC8AQ8IYD2 350 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 MARVELD2Q8N4S9 558 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 LINC01465Q8N7H1 131 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ANKFN1Q8N957 763 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 C16orf78Q8WTQ4 265 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ASPNQ9BXN1 380 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 FBRSQ9HAH7 460 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 TMA7Q9Y2S6 64 aaKnown RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 A6NHS1 94 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 GJB3O75712 270 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ST3GAL4Q11206 333 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 GTDC1Q4AE62 458 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 FAM26DQ5JW98 314 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ANKLE1Q8NAG6 615 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 OR5AR1Q8NGP9 310 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 KCNK13Q9HB14 408 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 PDE7BQ9NP56 450 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 C19orf25Q9UFG5 118 aaPredicted RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 PGAP2Q9UHJ9 254 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 GPR34Q9UPC5 381 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 PSMD9O00233 223 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 KCNJ13O60928 360 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ATXN1LP0C7T5 689 aaKnown RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 RNH1P13489 461 aaKnown RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 PITPNAQ00169 270 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 DSG2Q14126 1118 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 OGFRL1Q5TC84 451 aaPredicted RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 ZNF534Q76KX8 674 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 DPPA4Q7L190 304 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ZNF550Q7Z398 422 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 GALNT10Q86SR1 603 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 SUN3Q8TAQ9 357 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 METTL7AQ9H8H3 244 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 MAST2Q6P0Q8 1798 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ARL6IP5O75915 188 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ADRA1AP35348 466 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 FCHO2Q0JRZ9 810 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 RCAN2Q14206 197 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 SMU1Q2TAY7 513 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 PUS10Q3MIT2 529 aaKnown RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 MEDAGQ5VYS4 303 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 CES4AQ5XG92 561 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 DPY19L2P1Q6NXN4 242 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 ZNF551Q7Z340 670 aaPredicted RBP13.39□□□□□ -0.27
CDH3-201ENST00000264012 YIPF7Q8N8F6 280 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 SHKBP1Q8TBC3 707 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 HSPBAP1Q96EW2 488 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 TGM7Q96PF1 710 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 LRP5O75197 1615 aa13.39□□□□□ -0.27
CDH3-201ENST00000264012 NPIPA5E9PKD4 350 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 SEMA4FO95754 770 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 CASRP41180 1078 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 MS4A2Q01362 244 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 ZNF33BQ06732 778 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 PAGE3Q5JUK9 113 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 SLC27A4Q6P1M0 643 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 LIPIQ6XZB0 460 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH3-201ENST00000264012 MYRFLQ96LU7 910 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 RDH14Q9HBH5 336 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 TMEM184CQ9NVA4 438 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 NPIPA1Q9UND3 350 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 GLI3P10071 1580 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms