RNA–Protein interactions for RNA: ENST00000262519.13

SETD1A-201, Transcript of SET domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SETD1A, Length 6,451 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-201ENST00000262519 SQORQ9Y6N5 450 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 GABRDO14764 452 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 PRDX6P30041 224 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 NPRL3Q12980 569 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 DEFB134Q4QY38 66 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 SPANXN4Q5MJ08 99 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 OR4K14Q8NGD5 310 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 IL17FQ96PD4 163 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.39□□□□□ -0.27
SETD1A-201ENST00000262519 C14orf119Q9NWQ9 140 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 FESP07332 822 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 SMAD2Q15796 467 aaKnown RBP13.39□□□□□ -0.27
SETD1A-201ENST00000262519 DEFB110Q30KQ9 67 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 CYBRD1Q53TN4 286 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 LILRB2Q8N423 598 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 ZDHHC1Q8WTX9 485 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 ZDHHC12Q96GR4 267 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 INPP4AQ96PE3 977 aaPredicted RBP13.39□□□□□ -0.27
SETD1A-201ENST00000262519 SYT4Q9H2B2 425 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 PCDHB10Q9UN67 800 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 ANKRD28O15084 1053 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 ERCC1P07992 297 aaPredicted RBP13.39□□□□□ -0.27
SETD1A-201ENST00000262519 SOX3P41225 446 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 RAB28P51157 221 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 DPYSL2Q16555 572 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 RABL3Q5HYI8 236 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 LRIF1Q5T3J3 769 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 LHFPL3Q86UP9 236 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 OR9A1PQ8NGU1 263 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 ACDQ96AP0 544 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 TMEM246Q9BRR3 403 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 PIGVQ9NUD9 493 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 TUBA8Q9NY65 449 aaPredicted RBP13.39□□□□□ -0.27
SETD1A-201ENST00000262519 ADGRB3O60242 1522 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 DIP2AQ14689 1571 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 C2orf74A8MZ97 194 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 BMP1P13497 986 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 JUNDP17535 347 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 ELK4P28324 431 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 HTR7P34969 479 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 ZNF572Q7Z3I7 529 aaPredicted RBP13.39□□□□□ -0.27
SETD1A-201ENST00000262519 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.39□□□□□ -0.274e-17■■■■■ 166.7
SETD1A-201ENST00000262519 C2orf15Q8WU43 125 aaKnown RBP13.39□□□□□ -0.27
SETD1A-201ENST00000262519 FRZBQ92765 325 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 MSANTD3Q96H12 275 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 LMF1Q96S06 567 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 B3GNT2Q9NY97 397 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 MGAT4BQ9UQ53 548 aa13.39□□□□□ -0.27
SETD1A-201ENST00000262519 H3BSA7 217 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 CASC3O15234 703 aaKnown RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 IRAK2O43187 625 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 HLA-DPB1P04440 258 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 SFTPDP35247 375 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 STK19P49842 368 aaPredicted RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 GALNT1Q10472 559 aaPredicted RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 HERC3Q15034 1050 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 RNF111Q6ZNA4 994 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 SHISA6Q6ZSJ9 500 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 C10orf82Q8WW14 230 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 KCNIP1Q9NZI2 227 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 ST14Q9Y5Y6 855 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 CAMSAP1Q5T5Y3 1602 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 A0A0D9SEW6 157 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 ARVCFO00192 962 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 MAPK3P27361 379 aaPredicted RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 LTC4SQ16873 150 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 DPY19L1Q2PZI1 675 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 BRAT1Q6PJG6 821 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 CEACAM19Q7Z692 300 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 BORCS7Q96B45 105 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 PEX11GQ96HA9 241 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 NSUN3Q9H649 340 aaKnown RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 CLTCQ00610 1675 aaKnown RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 NOTOA8MTQ0 251 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 LRRN3E7EW58 273 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 CREG1O75629 220 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 YES1P07947 543 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 MAGEA6P43360 314 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 KIAA0930Q6ICG6 404 aaPredicted RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 C22orf39Q6P5X5 142 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 NPAS3Q8IXF0 933 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 KCNN1Q92952 543 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 FAM163AQ96GL9 167 aaPredicted RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 FAM83CQ9BQN1 747 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 LRRN3Q9H3W5 708 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 PDE7BQ9NP56 450 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 CLN5O75503 358 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 GSTT2P0CG29 244 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 GPRC6AQ5T6X5 926 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 NCBP2-AS2Q69YL0 99 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 BBS10Q8TAM1 723 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 KCTD13Q8WZ19 329 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 MED16Q9Y2X0 877 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 ZNF254O75437 659 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 HTR3BO95264 441 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 CRYZQ08257 329 aaKnown RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 TMEM115Q12893 351 aaPredicted RBP13.38□□□□□ -0.27
SETD1A-201ENST00000262519 C3orf38Q5JPI3 329 aa13.38□□□□□ -0.27
SETD1A-201ENST00000262519 TPGS2Q68CL5 300 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms