RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 SIGLEC15Q6ZMC9 328 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 KIF6Q6ZMV9 814 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC80Q76M96 950 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 MIER3Q7Z3K6 550 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CNTN4Q8IWV2 1026 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 DND1Q8IYX4 353 aaKnown RBP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC185Q8N715 623 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC148Q8NFR7 591 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC110Q8TBZ0 833 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 SUN5Q8TC36 379 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 MOCOSQ96EN8 888 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CDKN2AIPNLQ96HQ2 116 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 COG3Q96JB2 828 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 FAM111AQ96PZ2 611 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 RHOXF2Q9BQY4 288 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CCM2Q9BSQ5 444 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 IDI2Q9BXS1 227 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 LRRCC1Q9C099 1032 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 SLC7A5P2Q9GIP4 190 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 ABCG8Q9H221 673 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 SLC35D1Q9NTN3 355 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 AATFQ9NY61 560 aaKnown RBP eCLIP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CYP39A1Q9NYL5 469 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 SPG21Q9NZD8 308 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 GMEB2Q9UKD1 530 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 NOSIPQ9Y314 301 aaKnown RBP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 MRPL11Q9Y3B7 192 aaKnown RBP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 ATP8B3O60423 1300 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 IGLV7-46A0A075B6I9 117 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 LOC105371242A0A075B767 164 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 IGHV3-20A0A0C4DH32 117 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 hCG_38984A0A1B0GV85 526 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 MAGEB16A2A368 324 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 LMO7DNF2Z398 122 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 K7EQD1 137 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 LRCH4O75427 683 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 CLN5O75503 358 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 SLITRK3O94933 977 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 NXPH4O95158 308 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 SMC2O95347 1197 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 PDHBP11177 359 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 C4BPBP20851 252 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 PRKACGP22612 351 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 HILS1P60008 231 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 ACTR1AP61163 376 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 GBE1Q04446 702 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 SLC34A1Q06495 639 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 RCN2Q14257 317 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 STXBP2Q15833 593 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 AARDQ4LEZ3 155 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 BSPRYQ5W0U4 402 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 KCTD11Q693B1 232 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 ETFRF1Q6IPR1 90 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 FAAP20Q6NZ36 180 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 SLC27A4Q6P1M0 643 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 C3P1Q6ZMU1 363 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 ASPGQ86U10 573 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 OR56B2PQ8NGI1 322 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 SPATA3Q8NHX4 192 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 CNOT6LQ96LI5 555 aaKnown RBP3.74□□□□□ -1.81
CCDC54-201ENST00000261058 RUFY1Q96T51 708 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 KCNK16Q96T55 309 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 PCDHB18PQ96TA0 734 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 SH3GL1Q99961 368 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 PAPOLGQ9BWT3 736 aaKnown RBP3.74□□□□□ -1.81
CCDC54-201ENST00000261058 NMRK1Q9NWW6 199 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 LNPEPQ9UIQ6 1025 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 POMT2Q9UKY4 750 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 TMED7Q9Y3B3 224 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 AKNAQ7Z591 1439 aa3.74□□□□□ -1.81
CCDC54-201ENST00000261058 KDRP35968 1356 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 C2orf92A0A1B0GVN3 265 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 L7N2F9 121 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 M0R296 226 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 P2RX6O15547 441 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 GRAP2O75791 330 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 AKAP3O75969 853 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 DUS4LO95620 317 aaKnown RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 STAMBPO95630 424 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 ALPPP05187 535 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 ALPPL2P10696 532 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 SELEP16581 610 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 SERPINB6P35237 376 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 RDXP35241 583 aaKnown RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 FEN1P39748 380 aaKnown RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 ATP5OP48047 213 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 KIAA1024LP59773 190 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 SLC3A1Q07837 685 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 CALCOCO2Q13137 446 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 RIPK1Q13546 671 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 LY6DQ14210 128 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 RPS6KA1Q15418 735 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 MAJINQ3KP22 176 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 C14orf177Q52M58 125 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 BOLA3Q53S33 107 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 ZNF776Q68DI1 518 aaPredicted RBP3.73□□□□□ -1.81
CCDC54-201ENST00000261058 CENPPQ6IPU0 288 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 SLC25A24Q6NUK1 477 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 TMEM270Q6UE05 265 aa3.73□□□□□ -1.81
CCDC54-201ENST00000261058 LAX1Q8IWV1 398 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms