RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 HCRTR1O43613 425 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 PRMT3O60678 531 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 ALPLP05186 524 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 GKN3PP0CG01 181 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 FCGR1AP12314 374 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 NT5EP21589 574 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 TPP2P29144 1249 aaPredicted RBP8.65□□□□□ -1.03
CKAP2-201ENST00000258607 ALDH3A2P51648 485 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 SRSF11Q05519 484 aaKnown RBP8.65□□□□□ -1.03
CKAP2-201ENST00000258607 DUSP2Q05923 314 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 DEFB133Q30KQ1 61 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 C1orf53Q5VUE5 145 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 TMEM64Q6YI46 380 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 C6orf120Q7Z4R8 191 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 PIAS4Q8N2W9 510 aaPredicted RBP8.65□□□□□ -1.03
CKAP2-201ENST00000258607 TCAIMQ8N3R3 496 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 THAP3Q8WTV1 239 aaPredicted RBP8.65□□□□□ -1.03
CKAP2-201ENST00000258607 ZUFSPQ96AP4 578 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 DGCR14Q96DF8 476 aaKnown RBP8.65□□□□□ -1.03
CKAP2-201ENST00000258607 CEP295NLQ96MC4 621 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 C6orf62Q9GZU0 229 aaPredicted RBP8.65□□□□□ -1.03
CKAP2-201ENST00000258607 LHPPQ9H008 270 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 PRDM6Q9NQX0 595 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 TAS2R9Q9NYW1 312 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 C3orf18Q9UK00 162 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 PCDHB11Q9Y5F2 797 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 ICE1Q9Y2F5 2266 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 HELZP42694 1942 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 A0A087WXM4 84 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CDC14CA4D256 554 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 KMOO15229 486 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CEACAM5P06731 702 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 ZNF888P0CJ79 500 aaPredicted RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 MPC1LP0DKB6 136 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 SDHBP21912 280 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 HTR1BP28222 390 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 PIK3CBP42338 1070 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CLK1P49759 484 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 TPMTP51580 245 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 NCS1P62166 190 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 KCNC4Q03721 635 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 TARDBPQ13148 414 aaKnown RBP eCLIP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 KCNAB1Q14722 419 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 GXYLT1Q4G148 440 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 ZNF793Q6ZN11 406 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 VN1R5Q7Z5H4 357 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 PDZD3Q86UT5 571 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CARM1Q86X55 608 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 DCP2Q8IU60 420 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 L3MBTL4Q8NA19 623 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 GLB1L3Q8NCI6 653 aaPredicted RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 OR10G2Q8NGC3 310 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 OR5M3Q8NGP4 307 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 SMPDL3AQ92484 453 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 TAMM41Q96BW9 452 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 GAS2L1Q99501 681 aaPredicted RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 EFCAB11Q9BUY7 163 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CNPPD1Q9BV87 410 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 MRPS26Q9BYN8 205 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 EPB41L1Q9H4G0 881 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 ZNF556Q9HAH1 456 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 GPATCH2Q9NW75 528 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 MAT2BQ9NZL9 334 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CNIH4Q9P003 139 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CLEC1BQ9P126 229 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 NEUROG3Q9Y4Z2 214 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 PRSS38A1L453 326 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 TMEM247A6NEH6 219 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 SGK494L7N484 410 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 RGS5O15539 181 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 FGF19O95750 216 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 HMGN2P05204 90 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 DCNP07585 359 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CPMP14384 443 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CDH2P19022 906 aaPredicted RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 HSPA13P48723 471 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 DSTNP60981 165 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 RPP38P78345 283 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 ZDHHC20Q5W0Z9 365 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 FRMPD2BQ6IN97 320 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 FAM111BQ6SJ93 734 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 B3GNT6Q6ZMB0 384 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 GATAD2AQ86YP4 633 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 ANKFN1Q8N957 763 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 FAM174AQ8TBP5 190 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 GRHL3Q8TE85 626 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 LZICQ8WZA0 190 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 RSC1A1Q92681 617 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 MAPKAP1Q9BPZ7 522 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 CHCHD6Q9BRQ6 235 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 C1QTNF3Q9BXJ4 246 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 SLC2A11Q9BYW1 496 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 RSPH9Q9H1X1 276 aaPredicted RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 OR51I1Q9H343 314 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 ARMC1Q9NVT9 282 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 TVP23BQ9NYZ1 205 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 TTC36A6NLP5 189 aa8.64□□□□□ -1.03
CKAP2-201ENST00000258607 DENRO43583 198 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 SNUPNO95149 360 aaKnown RBP8.64□□□□□ -1.03
CKAP2-201ENST00000258607 GADD45GO95257 159 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms