RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 TM7SF3Q9NS93 570 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 CUEDC1Q9NWM3 386 aaPredicted RBP13.1□□□□□ -0.31
NCLN-201ENST00000246117 FBXL12Q9NXK8 326 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 MBD1Q9UIS9 605 aaPredicted RBP13.1□□□□□ -0.31
NCLN-201ENST00000246117 IGFBP1P08833 259 aaPredicted RBP13.1□□□□□ -0.31
NCLN-201ENST00000246117 IGFBP4P22692 258 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 GPR4P46093 362 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 SCN1BQ07699 218 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 NIPAL1Q6NVV3 410 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 TSPYL5Q86VY4 417 aaPredicted RBP13.1□□□□□ -0.31
NCLN-201ENST00000246117 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
NCLN-201ENST00000246117 C7orf61Q8IZ16 206 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 SIX5Q8N196 739 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 ZNF557Q8N988 423 aaPredicted RBP13.1□□□□□ -0.31
NCLN-201ENST00000246117 OR13F1Q8NGS4 319 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 ELAC1Q9H777 363 aaKnown RBP13.1□□□□□ -0.31
NCLN-201ENST00000246117 CFL2Q9Y281 166 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 UNCXA6NJT0 531 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 GDI1P31150 447 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 IDUAP35475 653 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 PHC1P78364 1004 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 ADPRMQ3LIE5 342 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 OR2A12Q8NGT7 310 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 BPIFB1Q8TDL5 484 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 RERGQ96A58 199 aaPredicted RBP13.1□□□□□ -0.31
NCLN-201ENST00000246117 PKMYT1Q99640 499 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 NRTNQ99748 197 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 GORASP2Q9H8Y8 452 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 MRPL39Q9NYK5 338 aaKnown RBP13.1□□□□□ -0.31
NCLN-201ENST00000246117 ENPP5Q9UJA9 477 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
NCLN-201ENST00000246117 GJA8P48165 433 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 CD300CQ08708 224 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 PARS2Q7L3T8 475 aaKnown RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 METTL27Q8N6F8 245 aaPredicted RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 B3GNT7Q8NFL0 401 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 DNAJB8Q8NHS0 232 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 RGMAQ96B86 450 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 ACTL8Q9H568 366 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 SP140LQ9H930 580 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 NMNAT1Q9HAN9 279 aaPredicted RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 AP1G1O43747 822 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 PCDHGA12O60330 932 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 KCNK5O95279 499 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 HPRP00739 348 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 ITPKBP27987 946 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 SLC6A11P48066 632 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 NRIP1P48552 1158 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 ITGA1P56199 1179 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 RGS1Q08116 209 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 MINDY4Q4G0A6 757 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 GTF2IRD2BQ6EKJ0 949 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 BORAQ6PGQ7 559 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 ZC3H14Q6PJT7 736 aaKnown RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 ADGRD2Q7Z7M1 963 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 GTF2IRD2Q86UP8 949 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 SLC30A2Q9BRI3 323 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 P2RX2Q9UBL9 471 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 SLC27A6Q9Y2P4 619 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 GREB1LQ9C091 1923 aaPredicted RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 A6NL46 340 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 A8MUA0 341 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 SMAD9O15198 467 aaKnown RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 SSNA1O43805 119 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 CPNE3O75131 537 aaKnown RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 BMP4P12644 408 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 CRISP1P54107 249 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 CDH11P55287 796 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 PRR5P85299 388 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 GAB1Q13480 694 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 PTGES3Q15185 160 aaKnown RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 SPHARQ15513 63 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 ZNF630Q2M218 657 aaPredicted RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 ZNF791Q3KP31 576 aaPredicted RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 FCRLBQ6BAA4 426 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 DEFB119Q8N690 84 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 PIP5K1AQ99755 562 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 DPH7Q9BTV6 452 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 OR51I1Q9H343 314 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 NTN4Q9HB63 628 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 ACOT13Q9NPJ3 140 aa13.09□□□□□ -0.31
NCLN-201ENST00000246117 RPL36Q9Y3U8 105 aaKnown RBP13.09□□□□□ -0.31
NCLN-201ENST00000246117 OR6C70A6NIJ9 312 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 CCRL2O00421 344 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 ALAS2P22557 587 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 RORCP51449 518 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 ADARB1P78563 741 aaKnown RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 SIM1P81133 766 aaPredicted RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 SFSWAPQ12872 951 aaKnown RBP13.08□□□□□ -0.32
NCLN-201ENST00000246117 TOR1AIP1Q5JTV8 583 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 ZNF691Q5VV52 312 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 LIPIQ6XZB0 460 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 C10orf111Q8N326 155 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 GOLM1Q8NBJ4 401 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 ATP6V1C2Q8NEY4 427 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 PIGXQ8TBF5 258 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 SMPDL3AQ92484 453 aa13.08□□□□□ -0.32
NCLN-201ENST00000246117 TUBA1CQ9BQE3 449 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms