RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 FANK1Q8TC84 345 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 GATA6Q92908 595 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 SCAMP4Q969E2 229 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 FCRL5Q96RD9 977 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 CCM2Q9BSQ5 444 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 CD244Q9BZW8 370 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 RNF208Q9H0X6 261 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 G3V2L1 256 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 SPARCP09486 303 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 C6P13671 934 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 TLE2Q04725 743 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 NTRK2Q16620 822 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 PABPC1LQ4VXU2 614 aaKnown RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 PRAMEF14Q5SWL7 426 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 PRAMEF13Q5VWM6 474 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 BBS10Q8TAM1 723 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 UROC1Q96N76 676 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 PRRG4Q9BZD6 226 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 ERVK-19Q9WJR5 959 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 RUVBL1Q9Y265 456 aaKnown RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 PRAMEF12O95522 483 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 DPP6P42658 865 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 ENPP7Q6UWV6 458 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 ZNF227Q86WZ6 799 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 ZNF761Q86XN6 746 aaPredicted RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 MGLLQ99685 303 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 OSBPL2Q9H1P3 480 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 PCDHGB5Q9Y5G0 923 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 F5H0A9 414 aaPredicted RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 E2F3O00716 465 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 S1PR4O95977 384 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 TYRP1P17643 537 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 MS4A13Q5J8X5 152 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 FOXB2Q5VYV0 432 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 PSAPL1Q6NUJ1 521 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 DUS1LQ6P1R4 473 aaKnown RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 PACRGLQ8N7B6 248 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 PHOSPHO1Q8TCT1 267 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 FZD3Q9NPG1 666 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 LYARQ9NX58 379 aaKnown RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 RCOR3Q9P2K3 495 aaPredicted RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 LRRN3E7EW58 273 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 PFKLP17858 780 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 DGKGP49619 791 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 TP53I3Q53FA7 332 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 NPLOC4Q8TAT6 608 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 TMEM41AQ96HV5 264 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 MCHR1Q99705 422 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 LRRN3Q9H3W5 708 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 NEUROD4Q9HD90 331 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 KCNJ13O60928 360 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 GYPBP06028 91 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 IL3P08700 152 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 AIF1P55008 147 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 GAS6Q14393 721 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 C6orf136Q5SQH8 315 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 TTLL10Q6ZVT0 673 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 ZGRF1Q86YA3 2104 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 IL12RB2Q99665 862 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 MYH1P12882 1939 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 MYH4Q9Y623 1939 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 CLDN4O14493 209 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 YY2O15391 372 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 DENRO43583 198 aaKnown RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 CASP3P42574 277 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 ZNF616Q08AN1 781 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 NHSL2Q5HYW2 709 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 FUT10Q6P4F1 479 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 ACTR6Q9GZN1 396 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 IGSF5Q9NSI5 407 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 MKLN1Q9UL63 735 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 TEX13CA0A0J9YWL9 993 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 CXCL11O14625 94 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 CAPN5O15484 640 aaPredicted RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 ITGA10O75578 1167 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 UPK1BO75841 260 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 CCNOP22674 350 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 CLCN7P51798 805 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 OAZ1P54368 228 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 BCL7AQ4VC05 210 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 MLIPQ5VWP3 458 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 GALNT13Q8IUC8 556 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 OR13J1Q8NGT2 312 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 HSPA12BQ96MM6 686 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 GPR174Q9BXC1 333 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 EIF2B3Q9NR50 452 aaKnown RBP7.23□□□□□ -1.25
RIF1-201ENST00000243326 DLGAP4Q9Y2H0 992 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 SLC27A6Q9Y2P4 619 aa7.23□□□□□ -1.25
RIF1-201ENST00000243326 RGPD2P0DJD1 1756 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 M0R3H8 397 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 BCKDHAP12694 445 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 CXCR1P25024 350 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 IGFALSP35858 605 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 XKR4Q5GH76 650 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 OR4E2Q8NGC2 313 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 OR4D6Q8NGJ1 314 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 TXLNGYQ9BZA5 131 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 SRMSQ9H3Y6 488 aa7.22□□□□□ -1.25
RIF1-201ENST00000243326 TEX13DA0A0J9YY54 714 aaPredicted RBP7.22□□□□□ -1.25
RIF1-201ENST00000243326 C1QTNF3-AMACRE9PGA6 284 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms