RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PLOD3O60568 738 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 C8BP07358 591 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 THEGLP0DJG4 465 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 CPN2P22792 545 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 SHMT2P34897 504 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 PNCKQ6P2M8 343 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 KLHL17Q6TDP4 642 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 ZFP41Q8N8Y5 198 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 GRHL3Q8TE85 626 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 PIGKQ92643 395 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 GFM1Q96RP9 751 aaKnown RBP11.52□□□□□ -0.56
CHPF2-201ENST00000035307 FAM129BQ96TA1 746 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 FUNDC2Q9BWH2 189 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 ZNF696Q9H7X3 374 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 PRDM6Q9NQX0 595 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 AGPAT4Q9NRZ5 378 aa11.52□□□□□ -0.56
CHPF2-201ENST00000035307 COLQQ9Y215 455 aaPredicted RBP11.52□□□□□ -0.56
CHPF2-201ENST00000035307 A0A096LPI6 279 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 PRR23D1E9PI22 279 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 PDE9AO76083 593 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 ADH1BP00325 375 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 PRR23D2P0DMB1 279 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 MYF5P13349 255 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 PFKLP17858 780 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 ITPKBP27987 946 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 HOXA9P31269 272 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 TIA1P31483 386 aaKnown RBP eCLIP11.52□□□□□ -0.577e-17■■■□□ 19.2
CHPF2-201ENST00000035307 SPIN4Q56A73 249 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 BHLHB9Q6PI77 547 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 DPPA4Q7L190 304 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 SHFQ7M4L6 423 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 NUDT13Q86X67 352 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 METTL25Q8N6Q8 603 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 OR8J3Q8NGG0 315 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 OR8K5Q8NH50 307 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 GPR151Q8TDV0 419 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF480Q8WV37 535 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 SGCDQ92629 289 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 TFAP2CQ92754 450 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 HLA-CQ95604 372 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 KLHDC7BQ96G42 594 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 DIRAS2Q96HU8 199 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 COX4I2Q96KJ9 171 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 HRASLS2Q9NWW9 162 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 FAM120CQ9NX05 1096 aaKnown RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 ENOPH1Q9UHY7 261 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 SPTAN1Q13813 2472 aaKnown RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 CBSLP0DN79 551 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 CD247P20963 164 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 PSMA1P25786 263 aaKnown RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 AOAHP28039 575 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 CBSP35520 551 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 CSNK1EP49674 416 aaKnown RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 CRTC2Q53ET0 693 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 PRSS36Q5K4E3 855 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 ATP6V1C2Q8NEY4 427 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 OR52L1Q8NGH7 329 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 PDXPQ96GD0 296 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 SERHL2Q9H4I8 314 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 REEP4Q9H6H4 257 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 SERHLQ9NQF3 203 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 DNMT3AQ9Y6K1 912 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 SLC1A7O00341 560 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 C1GALT1C1LP0DN25 315 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 JUNDP17535 347 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 CD9P21926 228 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 GTF2E2P29084 291 aaKnown RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 IFNGR2P38484 337 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 RXRGP48443 463 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 HOXC5Q00444 222 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 B4GALNT1Q00973 533 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 STX4Q12846 297 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 C5orf22Q49AR2 442 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 PLEKHS1Q5SXH7 462 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 KHDRBS2Q5VWX1 349 aaKnown RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 KIAA1614Q5VZ46 1190 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF554Q86TJ5 538 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 LRIG1Q96JA1 1093 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF597Q96LX8 424 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 TEFMQ96QE5 360 aaKnown RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 UBE2ZQ9H832 354 aaPredicted RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 GPR83Q9NYM4 423 aa11.52□□□□□ -0.57
CHPF2-201ENST00000035307 MRPS17Q9Y2R5 130 aaKnown RBP11.52□□□□□ -0.57
CHPF2-201ENST00000035307 SCN2AQ99250 2005 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 A8MV72 311 aaPredicted RBP11.51□□□□□ -0.57
CHPF2-201ENST00000035307 TARM1B6A8C7 271 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SCN2BO60939 215 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 XKP51811 444 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 PNLIPRP1P54315 467 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 COPZ1P61923 177 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ST3GAL4Q11206 333 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 DEFB133Q30KQ1 61 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 IQCCQ4KMZ1 466 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 DEFB134Q4QY38 66 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ZNF852Q6ZMS4 543 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SLC5A8Q8N695 610 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 IQCF1Q8N6M8 205 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 SLC38A4Q969I6 547 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 ISL2Q96A47 359 aa11.51□□□□□ -0.57
CHPF2-201ENST00000035307 TADA1Q96BN2 335 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms