RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tmem30aQ8VEK0 364 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rnf130Q8VEM1 419 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 AmotQ8VHG2 1126 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tmem150aQ91WN2 271 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Nphs2Q91X05 385 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 GatmQ9D964 423 aaKnown RBP12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Isoc2bQ9DCC7 210 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm35911A0A1D5RLS7 214 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 A0A286YCD0 109 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tmem201A2A8U2 664 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn1r9A2RST7 299 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm436B1AVU6 407 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn2r95L7N274 845 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Slc22a2O70577 553 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 DhfrP00375 187 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Fbln2P37889 1221 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Opn1swP51491 346 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Stard6P59096 233 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Hoxd1Q01822 328 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Mep1bQ61847 704 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm5416Q6IE28 97 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Lats2Q7TSJ6 1042 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 IpmkQ7TT16 396 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 GalpQ810H5 117 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Katnb1Q8BG40 658 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Acad9Q8JZN5 625 aaKnown RBP12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr1461Q8VEV7 312 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Agpat5Q9D1E8 365 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Trappc4Q9ES56 219 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tsga8Q9JJL0 238 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr49Q9Z1V0 313 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn1r10W4VSP8 311 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Unc80Q8BLN6 3261 aa12.86□□□□□ -0.35
Nup88-201ENSMUST00000035283 Trbv20A0A0B4J1H5 111 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cd300ld4A2A7W1 245 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Mgat4eA6H684 439 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 RerglB2RVE2 204 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Lrrc31F6VYM1 502 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr631F8VPJ9 319 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 DdostO54734 441 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cd19P25918 547 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Sept4P28661 478 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Hoxc5P32043 222 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Yap1P46938 488 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 ArntP53762 791 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rps13P62301 151 aaKnown RBP12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Coq7P97478 217 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gdf9Q07105 441 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Kcnk9Q3LS21 402 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Eif1adQ3THJ3 170 aaKnown RBP12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm853Q3UNZ2 425 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cd300ld3Q6SJQ5 245 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Tas2r13Q7M720 305 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Q8C3W1 322 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Micu2Q8CD10 432 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Oard1Q8R5F3 152 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Taf12Q8VE65 161 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cd276Q8VE98 316 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Lims1Q99JW4 325 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 SardhQ99LB7 919 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 LhppQ9D7I5 270 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Cib4Q9D9N5 185 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Acsl4Q9QUJ7 711 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Khdrbs3Q9R226 346 aaKnown RBP12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Sema6cQ9WTM3 931 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm14459A2BI73 179 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Fam46aD3Z5S8 447 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gm20431E9PY39 371 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr288E9Q1P2 318 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn2r9K7N6Z8 848 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Kif1cO35071 1100 aaKnown RBP12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Lsm2O35900 95 aaKnown RBP12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Stmn3O70166 180 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gh1P06880 216 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 CkmP07310 381 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Atp1b2P14231 290 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gpr3P35413 330 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 TstP52196 297 aaKnown RBP12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Polr1cP52432 346 aaKnown RBP12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Rab8bP61028 207 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Adra1aP97718 466 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 GaltQ03249 379 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Fut4Q11127 433 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Dpp10Q6NXK7 797 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Zmiz1Q6P1E1 1072 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Hfe2Q7TQ32 420 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Zadh2Q8BGC4 377 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Ppwd1Q8CEC6 646 aaKnown RBP12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Atat1Q8K341 421 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Gtf2h3Q8VD76 309 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Olfr1417Q8VGJ6 315 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Pfdn1Q9CWM4 122 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Creb3l4Q9D2A5 370 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Vmn1r65Q9EPS7 332 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Lpar2Q9JL06 348 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Acss2Q9QXG4 701 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 DstnQ9R0P5 165 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 ProdhQ9WU79 599 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 CcniQ9Z2V9 377 aa12.85□□□□□ -0.35
Nup88-201ENSMUST00000035283 Nt5c1aA3KFX0 365 aa12.84□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms