RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Man2b2O54782 1018 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Gon7P0C8B4 98 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Eef1a1P10126 462 aaKnown RBP12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Atp1b2P14231 290 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Ube2e3P52483 207 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Olfr1355Q7TQU9 310 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Pex26Q8BGI5 305 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Sit1Q8C503 180 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Ppp1r8Q8R3G1 351 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Tmem106aQ8VC04 261 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Acot7Q91V12 381 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Gins4Q99LZ3 223 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Rgs18Q99PG4 235 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Rpl38Q9JJI8 70 aaKnown RBP12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Grb14Q9JLM9 538 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 PpigA2AR02 752 aaKnown RBP12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Fam71f2B2RXB0 297 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Hax1O35387 280 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Ctnnd2O35927 1247 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Btnl2O70355 454 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Nudt2P56380 147 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Taar8aQ5QD07 344 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Paqr3Q6TCG8 311 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Scn4bQ7M729 228 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Olfr1252Q7TQZ2 314 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Commd7Q8BG94 200 aa12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Map4k5Q8BPM2 847 aaKnown RBP12.78□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Cd160O88875 185 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 JunP05627 334 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Dab1P97318 588 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Vamp1Q62442 118 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Sdc3Q64519 442 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Slc6a17Q8BJI1 727 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Lpcat2Q8BYI6 544 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 EloaQ8CB77 773 aaKnown RBP12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Tab1Q8CF89 502 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 LctlQ8K1F9 566 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Olfr801Q8VEU1 318 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Pcdha8Q91Y12 946 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Ubox5Q925F4 539 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Mcoln1Q99J21 580 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Mzt2Q9CQ25 159 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Rbm18Q9CR83 190 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 2310003L06RikQ9CV82 495 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Ccdc81Q9D5W4 654 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 TinagQ9WUR0 475 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 CtszQ9WUU7 306 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 SnapinQ9Z266 136 aa12.77□□□□□ -0.36
Prpf38b-201ENSMUST00000029480 Xkr6E9Q6C8 638 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Rnf169E9Q7F2 694 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Lhx8O35652 367 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Cdh1P09803 884 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 H2-Q8P14430 326 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 SftpcP21841 193 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Upp1P52624 311 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 MtpnP62774 118 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 H2-Q6P79568 326 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Gm10696Q3UTC4 357 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Zfp78Q5U406 512 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Ltbp3Q61810 1268 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Casd1Q7TN73 797 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Olfr1322Q7TQW3 310 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Rsbn1Q80T69 795 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Slc38a9Q8BGD6 560 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Sephs1Q8BH69 392 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Mettl2Q8BMK1 389 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Chil4Q91Z98 402 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Serpinb11Q9CQV3 388 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Mrpl45Q9D0Q7 306 aaKnown RBP12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Exoc2Q9D4H1 924 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Zswim2Q9D9X6 631 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Smg9Q9DB90 520 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 AgkQ9ESW4 421 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Upk1bQ9Z2C6 260 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Elf4Q9Z2U4 655 aa12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Anapc1P53995 1944 aaKnown RBP12.77□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Trav1A0A075B5Z4 110 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 1700080E11RikE9Q9G1 206 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Zfp141G3UY09 685 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Zfp871G5E905 615 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Psmb10O35955 273 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Hpcal1P62748 193 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Fbxo40P62932 710 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 MedagQ14BA6 303 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Pan3Q640Q5 837 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Ca4Q64444 305 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Usp7Q6A4J8 1103 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Ugt2a2Q6PDD0 528 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Nudcd1Q6PIP5 582 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Gpr171Q8BG55 319 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Rcn3Q8BH97 328 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Mettl6Q8BVH9 282 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Cnot3Q8K0V4 751 aaKnown RBP12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Vsx1Q91V10 363 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Nipal2Q91WC7 383 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 PgcQ9D7R7 392 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 PrelpQ9JK53 378 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Fads2Q9Z0R9 444 aaKnown RBP12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Gm15013V9GWY0 266 aa12.76□□□□□ -0.37
Prpf38b-201ENSMUST00000029480 Kcna10B2RQA1 511 aa12.76□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms