RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZCCHC7Q8N3Z6 543 aaKnown RBP14.06□□□□□ -0.16
PHGDH-231ENST00000641939 KIF2BQ8N4N8 673 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 CLEC18CQ8NCF0 446 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 B3GNT7Q8NFL0 401 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 SUN3Q8TAQ9 357 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 GRHL3Q8TE85 626 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 ZNF483Q8TF39 744 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-231ENST00000641939 NPAS2Q99743 824 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 SORBS1Q9BX66 1292 aaKnown RBP14.06□□□□□ -0.16
PHGDH-231ENST00000641939 ANKZF1Q9H8Y5 726 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 PPCSQ9HAB8 311 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 SEMA4BQ9NPR2 832 aaPredicted RBP14.06□□□□□ -0.16
PHGDH-231ENST00000641939 FBXW2Q9UKT8 454 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 PPT2Q9UMR5 302 aa14.06□□□□□ -0.16
PHGDH-231ENST00000641939 DIDO1Q9BTC0 2240 aaKnown RBP14.05□□□□□ -0.16
PHGDH-231ENST00000641939 MAN1A2O60476 641 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 PRAMEF2O60811 474 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 MYO1DO94832 1006 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 OTCP00480 354 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 SHBGP04278 402 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 CPN2P22792 545 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 PPP2R1BP30154 601 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 HERVK_113P63132 956 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 STX4Q12846 297 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 SLAMF1Q13291 335 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 MRPL49Q13405 166 aaKnown RBP14.05□□□□□ -0.16
PHGDH-231ENST00000641939 INAQ16352 499 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 GGTA1PQ4G0N0 100 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 C10orf62Q5T681 223 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-231ENST00000641939 FRG2Q64ET8 278 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 TTC19Q6DKK2 380 aaPredicted RBP14.05□□□□□ -0.16
PHGDH-231ENST00000641939 FAM180AQ6UWF9 173 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 RPS19BP1Q86WX3 136 aaKnown RBP14.05□□□□□ -0.16
PHGDH-231ENST00000641939 MTFMTQ96DP5 389 aaKnown RBP14.05□□□□□ -0.16
PHGDH-231ENST00000641939 FRG2BQ96QU4 278 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 ERVK-6Q9BXR3 956 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 DEFB126Q9BYW3 111 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 CDCP1Q9H5V8 836 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 ADAP2Q9NPF8 381 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 MS4A12Q9NXJ0 267 aa14.05□□□□□ -0.16
PHGDH-231ENST00000641939 GABRR3A8MPY1 467 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 ZNF500O60304 480 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-231ENST00000641939 LDB3O75112 727 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 CBX6O95503 412 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 ETHE1O95571 254 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 IFNA16P05015 189 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 ATP5F1P24539 256 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-231ENST00000641939 BSGP35613 385 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 SLCO1A2P46721 670 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 CLCN2P51788 898 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 CDH13P55290 713 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 IFT88Q13099 833 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 TUBA3CQ13748 450 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 UBAP2LQ14157 1087 aaKnown RBP14.04□□□□□ -0.16
PHGDH-231ENST00000641939 ELAVL1Q15717 326 aaKnown RBP14.04□□□□□ -0.16
PHGDH-231ENST00000641939 TUBA3EQ6PEY2 450 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 GPR180Q86V85 440 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 TDRPQ86YL5 185 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 TMEM132CQ8N3T6 1108 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 FAM26EQ8N5C1 309 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 APCDD1LQ8NCL9 501 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 OR4F6Q8NGB9 312 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 FAR1Q8WVX9 515 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 SERPINI1Q99574 410 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 UTP23Q9BRU9 249 aaKnown RBP14.04□□□□□ -0.16
PHGDH-231ENST00000641939 ZNF717Q9BY31 904 aaPredicted RBP14.04□□□□□ -0.16
PHGDH-231ENST00000641939 ALOXE3Q9BYJ1 711 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 VTI1BQ9UEU0 232 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 DCDC2Q9UHG0 476 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 PHF11Q9UIL8 331 aa14.04□□□□□ -0.16
PHGDH-231ENST00000641939 PPIEQ9UNP9 301 aaKnown RBP14.04□□□□□ -0.16
PHGDH-231ENST00000641939 CROCCQ5TZA2 2017 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 ICE1Q9Y2F5 2266 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 TRBV11-1A0A0K0K1C0 115 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 A0A1B0GTL3 188 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 A0A1W2PPM1 405 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 SMIM23A6NLE4 172 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 PPP6CO00743 305 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 CDK2AP1O14519 115 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 DLX3O60479 287 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 SUPT7LO94864 414 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 SEMA3DO95025 777 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 TSPAN8P19075 237 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 IMPDH1P20839 514 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 TLX1P31314 330 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-231ENST00000641939 HSD17B3P37058 310 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 GPR143P51810 404 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 MLF1P58340 268 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 TNFRSF17Q02223 184 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 CLCQ05315 142 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 SRSF1Q07955 248 aaKnown RBP eCLIP14.03□□□□□ -0.16
PHGDH-231ENST00000641939 SERTAD2Q14140 314 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 RASA2Q15283 850 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 OR1C1Q15619 314 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 UNC50Q53HI1 259 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 ZNF766Q5HY98 468 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 ZNF678Q5SXM1 525 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 CYP20A1Q6UW02 462 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 SLC22A9Q8IVM8 553 aa14.03□□□□□ -0.16
PHGDH-231ENST00000641939 BCORP1Q8N888 145 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms