RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 SNX11Q9Y5W9 270 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 SCN8AQ9UQD0 1980 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 AP2A2O94973 939 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 HLA-DQB1P01920 261 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 CSF2P04141 144 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 IRF1P10914 325 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 GPC1P35052 558 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 GSTM5P46439 218 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 RAB25P57735 213 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 MXD1Q05195 221 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 ZNF91Q05481 1191 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 SF1Q15637 639 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 OCLNQ16625 522 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 ATP13A5Q4VNC0 1218 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 C12orf73Q69YU5 71 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 TPRG1Q6ZUI0 275 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 IQCF2Q8IXL9 164 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 SNAPC3Q92966 411 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 KCTD7Q96MP8 289 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 GTPBP2Q9BX10 602 aaKnown RBP14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 DNAJC27Q9NZQ0 273 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 RNF181Q9P0P0 153 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 GULP1Q9UBP9 304 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 STOML2Q9UJZ1 356 aa14.15□□□□□ -0.14
CACNA1A-220ENST00000635988 K7ERQ8 282 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 ARAFP10398 606 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 CPEP16870 476 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 SERPINA4P29622 427 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 CSKP41240 450 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 PNLIPRP1P54315 467 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 TATDN3Q17R31 274 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 LIPKQ5VXJ0 399 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 TRIQKQ629K1 86 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 METAP1DQ6UB28 335 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 RSPO2Q6UXX9 243 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF852Q6ZMS4 543 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 VRK3Q8IV63 474 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 DUSP18Q8NEJ0 188 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 DEDD2Q8WXF8 326 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 NELL2Q99435 816 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 PRM3Q9NNZ6 103 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 RBFOX1Q9NWB1 397 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 RAB23Q9ULC3 237 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 A0A0G2JMP0 313 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 E7EQ34 232 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 SLC10A3P09131 477 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 PRKAR1AP10644 381 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 IFNA8P32881 189 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 SDC2P34741 201 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 CHI3L1P36222 383 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 PPP3R1P63098 170 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 CDH18Q13634 790 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 CRTC1Q6UUV9 634 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 DPY19L3Q6ZPD9 716 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 USP30Q70CQ3 517 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 METTL3Q86U44 580 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 TSPAN33Q86UF1 283 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 RTN4RL1Q86UN2 441 aaPredicted RBP14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 TRPV1Q8NER1 839 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 ALG14Q96F25 216 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 CITED4Q96RK1 184 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 TSSK6Q9BXA6 273 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 TRPM5Q9NZQ8 1165 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 REV1Q9UBZ9 1251 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 DIMT1Q9UNQ2 313 aaKnown RBP14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 PCDHGB7Q9Y5F8 929 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 VWA8A3KMH1 1905 aa14.14□□□□□ -0.15
CACNA1A-220ENST00000635988 NPIPB15A6NHN6 443 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 A8MX80 341 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 GPR37L1O60883 481 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 OR2B3O76000 313 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 LATS1O95835 1130 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 C6orf47O95873 294 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 IGSF6O95976 241 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 MSL3P1P0C860 447 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 PTBP1P26599 531 aaKnown RBP eCLIP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 TGM4P49221 684 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF763Q0D2J5 394 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 HEPACAMQ14CZ8 416 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 CYP27C1Q4G0S4 372 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ZNF628Q5EBL2 1059 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 WDR45BQ5MNZ6 344 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 FAM217AQ8IXS0 508 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 OR4K1Q8NGD4 311 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 CLIP3Q96DZ5 547 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 DHRS9Q9BPW9 319 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 KLF16Q9BXK1 252 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 RC3H2Q9HBD1 1191 aaKnown RBP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 HCN2Q9UL51 889 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ALPK3Q96L96 1907 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 WWP2O00308 870 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 STK25O00506 426 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 PLD2O14939 933 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ETHE1O95571 254 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 SRCP12931 536 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 ATP1B2P14415 290 aaPredicted RBP14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 IRS1P35568 1242 aa14.13□□□□□ -0.15
CACNA1A-220ENST00000635988 TUFMP49411 452 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms