RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 LEKR1Q6ZMV7 388 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 TMEM126BQ8IUX1 230 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 GPC2Q8N158 579 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 FAM89BQ8N5H3 189 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 SLC37A3Q8NCC5 494 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 URGCPQ8TCY9 931 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 CD99L2Q8TCZ2 262 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 DYRK2Q92630 601 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 EEF2KMTQ96G04 330 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 ZNF334Q9HCZ1 680 aaPredicted RBP5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 KCNMB3Q9NPA1 279 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 PANK4Q9NVE7 773 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 EXOC6BQ9Y2D4 811 aa5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 RPH3AQ9Y2J0 694 aaPredicted RBP5.35□□□□□ -1.55
SMARCA2-240ENST00000635392 KLF11O14901 512 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 KHDRBS3O75525 346 aaKnown RBP5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 CLPTM1O96005 669 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 CD48P09326 243 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 GAP43P17677 238 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 OR3A3P47888 321 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 TRA2AQ13595 282 aaKnown RBP eCLIP5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 TRIM29Q14134 588 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 GK2Q14410 553 aaPredicted RBP5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 CCDC57Q2TAC2 916 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 TMEM99Q8N816 258 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 OR52E1Q8NGJ3 308 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 GGHQ92820 318 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 RFT1Q96AA3 541 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 LGALS12Q96DT0 336 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 LMLNQ96KR4 655 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 LPAR4Q99677 370 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 DDX50Q9BQ39 737 aaKnown RBP5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 ZNF71Q9NQZ8 489 aaPredicted RBP5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 TBC1D13Q9NVG8 400 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 TRIM10Q9UDY6 481 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 ELF5Q9UKW6 265 aaPredicted RBP5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 KCNJ14Q9UNX9 436 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 ATP6V0A2Q9Y487 856 aa5.34□□□□□ -1.55
SMARCA2-240ENST00000635392 TRIP12Q14669 1992 aaPredicted RBP5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 ABCC12Q96J65 1359 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 AFDNP55196 1824 aaKnown RBP5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 SERINC4A6NH21 518 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 SRRM4A7MD48 611 aaKnown RBP5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 M0R296 226 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 TLR4O00206 839 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 EPHB6O15197 1021 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 TEX28O15482 410 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 UBTFL1P0CB47 393 aaPredicted RBP5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 PCP11498 1178 aaKnown RBP5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 CD86P42081 329 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 MAGEA11P43364 429 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 ACKR1Q16570 336 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 ZNF74Q16587 644 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 C9orf50Q5SZB4 431 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 ETFRF1Q6IPR1 90 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 SLC24A5Q71RS6 500 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 SMYD1Q8NB12 490 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 OR4C15Q8NGM1 316 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 KIAA1524Q8TCG1 905 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 FRAT1Q92837 279 aaPredicted RBP5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 GIMAP5Q96F15 307 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 DTD2Q96FN9 168 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 NAF1Q96HR8 494 aaKnown RBP5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 ZNF560Q96MR9 790 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 NEDD4LQ96PU5 975 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 NAPBQ9H115 298 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 NINJ2Q9NZG7 142 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 C19orf25Q9UFG5 118 aaPredicted RBP5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 SLC12A6Q9UHW9 1150 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 PSORS1C1Q9UIG5 152 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 ODF2LQ9ULJ1 636 aa5.33□□□□□ -1.56
SMARCA2-240ENST00000635392 ANKRD36CQ5JPF3 1778 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 ABCC4O15439 1325 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 A0A087WUV0 522 aaPredicted RBP5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 C2orf92A0A1B0GVN3 265 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 ZNF732B4DXR9 585 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 EXTL3O43909 919 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 SAP30O75446 220 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 MT-ND2P03891 347 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 AHCYP23526 432 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 OR1D2P34982 312 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 CSNK2BP67870 215 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 GFPT1Q06210 699 aaPredicted RBP5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 MSLNQ13421 630 aaPredicted RBP5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 PDK1Q15118 436 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 MAPK11Q15759 364 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 CCDC6Q16204 474 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 FAM53AQ6NSI3 398 aaPredicted RBP5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 BTN2A1Q7KYR7 527 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 SLC26A9Q7LBE3 791 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 SIDT2Q8NBJ9 832 aaKnown RBP5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 SLCO4A1Q96BD0 722 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 RUFY1Q96T51 708 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 ZNF577Q9BSK1 485 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 HSD3B7Q9H2F3 369 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 TMEM245Q9H330 911 aa5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 RPF1Q9H9Y2 349 aaKnown RBP5.32□□□□□ -1.56
SMARCA2-240ENST00000635392 MAN2C1Q9NTJ4 1040 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms