RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 BTG2P78543 158 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 TBL3Q12788 808 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 SLC13A2Q13183 592 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 LACTB2Q53H82 288 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 SFT2D3Q587I9 215 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 VWA5B1Q5TIE3 1220 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 IRAK1BP1Q5VVH5 260 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 PLAG1Q6DJT9 500 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 MRM1Q6IN84 353 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 CYP20A1Q6UW02 462 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 COMMD6Q7Z4G1 85 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 CUZD1Q86UP6 607 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 HPS6Q86YV9 775 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 KBTBD2Q8IY47 623 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 EFCAB3Q8N7B9 438 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 OR6Y1Q8NGX8 325 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 TLCD1Q96CP7 247 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 IMMP1LQ96LU5 166 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 HBEGFQ99075 208 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 SMAD5Q99717 465 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 ACPTQ9BZG2 426 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 LHPPQ9H008 270 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 VIPAS39Q9H9C1 493 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 KCNK9Q9NPC2 374 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 NECTIN3Q9NQS3 549 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 PRTFDC1Q9NRG1 225 aa13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 RALYQ9UKM9 306 aaKnown RBP13.85□□□□□ -0.19
CDC42BPB-209ENST00000634889 A6NL46 340 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 EIF4E1BA6NMX2 242 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 PROM1O43490 865 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 TMPRSS11DO60235 418 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 CTNSO60931 367 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 SERPINA7P05543 415 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 FAM58BPP0C7Q3 252 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 PPP2R1BP30154 601 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 HTR6P50406 440 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 HNRNPFP52597 415 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 HNRNPH2P55795 449 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 OR4D2P58180 307 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 TNFRSF17Q02223 184 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 ACTN3Q08043 901 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 Q0VFX4 171 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 TERF2Q15554 542 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 EXT1Q16394 746 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 SPIN4Q56A73 249 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 ARL13AQ5H913 290 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 JMJD6Q6NYC1 403 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 RNF165Q6ZSG1 346 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 TRIM46Q7Z4K8 759 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 NUDCD3Q8IVD9 361 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 TMEM52Q8NDY8 209 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 TANKQ92844 425 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 ZBTB9Q96C00 473 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 THOC3Q96J01 351 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 LPAR4Q99677 370 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 WDR77Q9BQA1 342 aaPredicted RBP13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 NUDT9Q9BW91 350 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 SEMA4CQ9C0C4 833 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 TNFRSF12AQ9NP84 129 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 C5AR2Q9P296 337 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 FBXW2Q9UKT8 454 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 TP53TG5Q9Y2B4 290 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 ZNF451Q9Y4E5 1061 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 ATG4BQ9Y4P1 393 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 ASB4Q9Y574 426 aa13.84□□□□□ -0.19
CDC42BPB-209ENST00000634889 IGHV3-20A0A0C4DH32 117 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 TMEM120BA0PK00 339 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 MASP2O00187 686 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 AZIN1O14977 448 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 GUCY1B2O75343 617 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 SEC24DO94855 1032 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 SNUPNO95149 360 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 CHEK2O96017 543 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 KLK1P06870 262 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 FGF4P08620 206 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 PRR35P0CG20 571 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 NR2F6P10588 404 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 TPP2P29144 1249 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 MAPK12P53778 367 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 MAGOHP61326 146 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 SERTAD2Q14140 314 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 MPP2Q14168 576 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 CCNYL2Q5T2Q4 361 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 AGBL2Q5U5Z8 902 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 FAM219BQ5XKK7 198 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 KANK2Q63ZY3 851 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 PAPD4Q6PIY7 484 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 ZCCHC23Q6ZST2 131 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 ASB18Q6ZVZ8 466 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 PARP9Q8IXQ6 854 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 PPP1R14CQ8TAE6 165 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 M1APQ8TC57 530 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 CHTF18Q8WVB6 975 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 SHCBP1LQ9BZQ2 653 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 ZNF552Q9H707 407 aaPredicted RBP13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 RPF2Q9H7B2 306 aaKnown RBP13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 WDR41Q9HAD4 459 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 CLDN16Q9Y5I7 305 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 MED13Q9UHV7 2174 aa13.83□□□□□ -0.2
CDC42BPB-209ENST00000634889 PIEZO2Q9H5I5 2752 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms