RNA–Protein interactions for RNA: ENST00000628401.1

NPTN-IT1-201, NPTN intronic transcript 1, humanhuman

BASIC

Gene NPTN-IT1, Length 2,283 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-IT1-201ENST00000628401 LILRA3Q8N6C8 439 aaPredicted RBP12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ATG16L2Q8NAA4 619 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 VN1R2Q8NFZ6 395 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 P2RY13Q9BPV8 354 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ACPTQ9BZG2 426 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ATG10Q9H0Y0 220 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 REEP1Q9H902 201 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PLCXD1Q9NUJ7 323 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 DPP7Q9UHL4 492 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 KLHL21Q9UJP4 597 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 NOSIPQ9Y314 301 aaKnown RBP12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SAMHD1Q9Y3Z3 626 aaKnown RBP12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 KCNE2Q9Y6J6 123 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PLXNA2O75051 1894 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 NUP210Q8TEM1 1887 aaPredicted RBP12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 LINC00862A6NCI5 91 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ATP6V1G2-DDX39BF2Z307 99 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HIST1H2AGP0C0S8 130 aaPredicted RBP12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ACADMP11310 421 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PSKH1P11801 424 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 EPORP19235 508 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HIST1H2ADP20671 130 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ITPKAP23677 461 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 KDELR2P33947 212 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MMP12P39900 470 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CDKN2CP42773 168 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CTSKP43235 329 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CTSCP53634 463 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ITGA1P56199 1179 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 STK11Q15831 433 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 VMACQ2NL98 169 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CBLL1Q75N03 491 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 DPPA4Q7L190 304 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 EIF3MQ7L2H7 374 aaKnown RBP12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 P3H2Q8IVL5 708 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 FLCNQ8NFG4 579 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ASB11Q8WXH4 323 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 FGF13Q92913 245 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 AP2M1Q96CW1 435 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 GIMAP5Q96F15 307 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HIST1H2AHQ96KK5 128 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HRASLS5Q96KN8 279 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HIST1H2AJQ99878 128 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 H2AFJQ9BTM1 129 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ZBTB20Q9HC78 741 aaPredicted RBP12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TEKT2Q9UIF3 430 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RNF6Q9Y252 685 aa12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 YBX2Q9Y2T7 364 aaKnown RBP12.85□□□□□ -0.35
NPTN-IT1-201ENST00000628401 XIRP2A4UGR9 3374 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TSPAN11A1L157 253 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MEIOCA2RUB1 952 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HEPACAM2A8MVW5 462 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TSPAN6O43657 245 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PCDHGA12O60330 932 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 C9P02748 559 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 IFNA16P05015 189 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ACPPP15309 386 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 UQCRC1P31930 480 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TGFBR1P36897 503 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 LIPAP38571 399 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PREPP48147 710 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PTCHD3Q3KNS1 767 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SHEQ5VZ18 495 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ZNF551Q7Z340 670 aaPredicted RBP12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ANKRD46Q86W74 232 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CCDC71Q8IV32 467 aaPredicted RBP12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ENTHD1Q8IYW4 607 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TRAM1L1Q8N609 369 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RASGEF1AQ8N9B8 481 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 NELL1Q92832 810 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MYDGFQ969H8 173 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TOE1Q96GM8 510 aaKnown RBP12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ASB16Q96NS5 453 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 HHIPQ96QV1 700 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 COPS4Q9BT78 406 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SLC12A9Q9BXP2 914 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 GABARAPL3Q9BY60 117 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SLC32A1Q9H598 525 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 SCPEP1Q9HB40 452 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 RASSF1Q9NS23 344 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 DLGAP4Q9Y2H0 992 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 LYVE1Q9Y5Y7 322 aa12.84□□□□□ -0.35
NPTN-IT1-201ENST00000628401 NPIPB8E9PQR5 432 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CPNE3O75131 537 aaKnown RBP12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PDYNP01213 254 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 C8GP07360 202 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 MAPK12P53778 367 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 DCDC1P59894 354 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 VLDLRP98155 873 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CAMK2GQ13555 558 aaPredicted RBP12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 CDKL4Q5MAI5 379 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 PLEKHS1Q5SXH7 462 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 NXNL2Q5VZ03 156 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 TECPR1Q7Z6L1 1165 aa12.83□□□□□ -0.35
NPTN-IT1-201ENST00000628401 ETFBKMTQ8IXQ9 262 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms