RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SBK3P0C264 359 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 PPP2R1BP30154 601 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 HERVK_113P63132 956 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 DDX39BQ13838 428 aaKnown RBP20.89■□□□□ 0.93
SF1-220ENST00000626028 ELOAQ14241 798 aaKnown RBP20.89■□□□□ 0.93
SF1-220ENST00000626028 ZRSR2Q15696 482 aaKnown RBP20.89■□□□□ 0.93
SF1-220ENST00000626028 TEX35Q5T0J7 233 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 TMEM52Q8NDY8 209 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 OR52B6Q8NGF0 335 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 VMP1Q96GC9 406 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 CSF3RQ99062 836 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 SERPINI1Q99574 410 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 MAPKAP1Q9BPZ7 522 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 ERVK-6Q9BXR3 956 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 DDX31Q9H8H2 851 aaKnown RBP20.89■□□□□ 0.93
SF1-220ENST00000626028 TRIM45Q9H8W5 580 aaPredicted RBP20.89■□□□□ 0.93
SF1-220ENST00000626028 DCDC2Q9UHG0 476 aa20.89■□□□□ 0.93
SF1-220ENST00000626028 SPTBN1Q01082 2364 aaKnown RBP20.89■□□□□ 0.93
SF1-220ENST00000626028 ANKUB1A6NFN9 424 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 A8MT66 165 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 PLPP1O14494 284 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 FCHO1O14526 889 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 MYO1DO94832 1006 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 CRYABP02511 175 aaKnown RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 TLX1P31314 330 aaPredicted RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 ARL1P40616 181 aaPredicted RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 HNRNPFP52597 415 aaKnown RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 RPS13P62277 151 aaKnown RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 STX4Q12846 297 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 TRAF3Q13114 568 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 SLAMF1Q13291 335 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 TUBA3CQ13748 450 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 NR6A1Q15406 480 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 FRG2Q64ET8 278 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 ZNF324BQ6AW86 544 aaPredicted RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 TUBA3EQ6PEY2 450 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 GPR180Q86V85 440 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 TDRPQ86YL5 185 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 SLC22A9Q8IVM8 553 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 MORN4Q8NDC4 146 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 MDS2Q8NDY4 140 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 OR14A16Q8NHC5 309 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 ZNF483Q8TF39 744 aaPredicted RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 TANKQ92844 425 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 FRG2BQ96QU4 278 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 NPAS2Q99743 824 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 SLX1AQ9BQ83 275 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 DEFB126Q9BYW3 111 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 ZBTB26Q9HCK0 441 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 PNO1Q9NRX1 252 aaKnown RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 LYARQ9NX58 379 aaKnown RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 CLCA3PQ9Y6N3 262 aa20.88■□□□□ 0.93
SF1-220ENST00000626028 USP9YO00507 2555 aaPredicted RBP20.88■□□□□ 0.93
SF1-220ENST00000626028 RTCAO00442 366 aaKnown RBP20.87■□□□□ 0.93
SF1-220ENST00000626028 RASAL1O95294 804 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 CPN2P22792 545 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 TRHRP34981 398 aaPredicted RBP20.87■□□□□ 0.93
SF1-220ENST00000626028 GPR143P51810 404 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 SRSF1Q07955 248 aaKnown RBP eCLIP20.87■□□□□ 0.934e-12■□□□□ 10.5
SF1-220ENST00000626028 IFT88Q13099 833 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 FCRLBQ6BAA4 426 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 MILR1Q7Z6M3 343 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 MZB1Q8WU39 189 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 ALOXE3Q9BYJ1 711 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 RYDENQ9NUL5 291 aaKnown RBP20.87■□□□□ 0.93
SF1-220ENST00000626028 OLAHQ9NV23 265 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 AHSPQ9NZD4 102 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 TMEM216Q9P0N5 145 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 STK38LQ9Y2H1 464 aa20.87■□□□□ 0.93
SF1-220ENST00000626028 GABRR3A8MPY1 467 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 TGFBR3LH3BV60 316 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 CD46P15529 392 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 ATP5F1P24539 256 aaPredicted RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 CD96P40200 585 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 BUD31P41223 144 aaPredicted RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 MLF1P58340 268 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 NAA20P61599 178 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 IGLV3-21P80748 117 aaPredicted RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 MRPL49Q13405 166 aaKnown RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 ZNF766Q5HY98 468 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 TTC19Q6DKK2 380 aaPredicted RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 NUDT13Q86X67 352 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 KIF2BQ8N4N8 673 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 TMEM178AQ8NBL3 297 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 OR8K3Q8NH51 312 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 UBLCP1Q8WVY7 318 aaPredicted RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 CCDC126Q96EE4 140 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 SCMH1Q96GD3 660 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 NSUN5Q96P11 429 aaKnown RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 ZNF717Q9BY31 904 aaPredicted RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 CDCP1Q9H5V8 836 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 BRF2Q9HAW0 419 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 SEMA4BQ9NPR2 832 aaPredicted RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 ADAM29Q9UKF5 820 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 SNX6Q9UNH7 406 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 SPTAN1Q13813 2472 aaKnown RBP20.86■□□□□ 0.93
SF1-220ENST00000626028 HECTD1Q9ULT8 2610 aa20.86■□□□□ 0.93
SF1-220ENST00000626028 CROCCQ5TZA2 2017 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 A0A0A6YYD5 115 aa20.85■□□□□ 0.93
SF1-220ENST00000626028 A8MUA0 341 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms