RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 IL6P05231 212 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 ITGB7P26010 798 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 CTGFP29279 349 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 MAGEA2P43356 314 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 TAF6P49848 677 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 HNMTP50135 292 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 P2RY4P51582 365 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 CDKN2DP55273 166 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 PUM1Q14671 1186 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS11-207ENST00000620429 SSX1Q16384 188 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 KLHDC8BQ8IXV7 354 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 ADGRF3Q8IZF5 1079 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 SLC34A3Q8N130 599 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 LIX1Q8N485 282 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 OR2T12Q8NG77 320 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 NSUN5Q96P11 429 aaKnown RBP9.94□□□□□ -0.82
VPS11-207ENST00000620429 SOSTQ9BQB4 213 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 PRKD2Q9BZL6 878 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 PRO3102Q9H379 93 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 TUBB1Q9H4B7 451 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 DCAF13Q9NV06 445 aaKnown RBP9.94□□□□□ -0.82
VPS11-207ENST00000620429 ZNF222Q9UK12 451 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 HTTP42858 3142 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 A0A1W2PQL4 384 aaPredicted RBP9.94□□□□□ -0.82
VPS11-207ENST00000620429 C2orf74A8MZ97 194 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 SGK494L7N484 410 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 ARNTLO00327 626 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 CCL22O00626 93 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 PRAMEF1O95521 474 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 APOC3P02656 99 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 RLN2P04090 185 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 LPLP06858 475 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 STSP08842 583 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 FBP1P09467 338 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 CTSHP09668 335 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 EN2P19622 333 aaPredicted RBP9.94□□□□□ -0.82
VPS11-207ENST00000620429 C4BPBP20851 252 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 PTBP1P26599 531 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS11-207ENST00000620429 ADRA1AP35348 466 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 SPAM1P38567 509 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 RFC3P40938 356 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 MTPNP58546 118 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 YWHAHQ04917 246 aaPredicted RBP9.94□□□□□ -0.82
VPS11-207ENST00000620429 TEAD4Q15561 434 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 SNAPC1Q16533 368 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 DDI2Q5TDH0 399 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 ZER1Q7Z7L7 766 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 TMEM145Q8NBT3 493 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 DMBX1Q8NFW5 382 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 ELP5Q8TE02 316 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 SH3RF2Q8TEC5 729 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 SLC25A46Q96AG3 418 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 MTERF3Q96E29 417 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 SCMH1Q96GD3 660 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 ERMAPQ96PL5 475 aaPredicted RBP9.94□□□□□ -0.82
VPS11-207ENST00000620429 BARD1Q99728 777 aaKnown RBP9.94□□□□□ -0.82
VPS11-207ENST00000620429 NIT2Q9NQR4 276 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 RBM22Q9NW64 420 aaKnown RBP eCLIP9.94□□□□□ -0.82
VPS11-207ENST00000620429 SPHK1Q9NYA1 384 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 ZIM2Q9NZV7 527 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 PCDHGA6Q9Y5G7 932 aa9.94□□□□□ -0.82
VPS11-207ENST00000620429 FNDC1Q4ZHG4 1894 aaPredicted RBP9.94□□□□□ -0.82
VPS11-207ENST00000620429 PRAMEF33A0A0G2JMD5 474 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 LOC102723532A0A0G2JNH3 316 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 ZNF729A6NN14 1252 aaPredicted RBP9.93□□□□□ -0.82
VPS11-207ENST00000620429 PTGESO14684 152 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 PRAMEF10O60809 474 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 PAGE1O75459 146 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CRCPO75575 148 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 SERPINA1P01009 418 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 HLA-DQB2P05538 268 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 DNASE1P24855 282 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CAPZA1P52907 286 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 NPRL3Q12980 569 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CDH18Q13634 790 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 SLC14A2Q15849 920 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 METAP1DQ6UB28 335 aaPredicted RBP9.93□□□□□ -0.82
VPS11-207ENST00000620429 GPRIN1Q7Z2K8 1008 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CCDC117Q8IWD4 279 aaPredicted RBP9.93□□□□□ -0.82
VPS11-207ENST00000620429 KRT78Q8N1N4 520 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CLDN22Q8N7P3 220 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 IL17RCQ8NAC3 791 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 ATP6V1C2Q8NEY4 427 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 H2AFJQ9BTM1 129 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 TMEM43Q9BTV4 400 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 PDCD10Q9BUL8 212 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CDCA4Q9BXL8 241 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 NKX6-2Q9C056 277 aaPredicted RBP9.93□□□□□ -0.82
VPS11-207ENST00000620429 AP5M1Q9H0R1 490 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 PPP1R3EQ9H7J1 279 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 SNTG1Q9NSN8 517 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 MIOXQ9UGB7 285 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 LRFN2Q9ULH4 789 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 PADI2Q9Y2J8 665 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 CRYL1Q9Y2S2 319 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 TIMM13Q9Y5L4 95 aaPredicted RBP9.93□□□□□ -0.82
VPS11-207ENST00000620429 MIA3Q5JRA6 1907 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 C17orf102A2RUQ5 167 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 TTLL8A6PVC2 850 aa9.93□□□□□ -0.82
VPS11-207ENST00000620429 ZNF806P0C7X5 589 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms