RNA–Protein interactions for RNA: ENST00000617875.4

RECQL4-209, Transcript of RecQ like helicase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RECQL4, Length 3,809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-209ENST00000617875 OR5AR1Q8NGP9 310 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 KLHL28Q9NXS3 571 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 SATB2Q9UPW6 733 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 GSTK1Q9Y2Q3 226 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 GFRA2O00451 464 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 ERI3O43414 337 aaKnown RBP15.31■□□□□ 0.04
RECQL4-209ENST00000617875 CSTF2P33240 577 aaKnown RBP eCLIP15.31■□□□□ 0.04
RECQL4-209ENST00000617875 ARPC4P59998 168 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 IFITM3Q01628 133 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 ZNF763Q0D2J5 394 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
RECQL4-209ENST00000617875 CAMK1Q14012 370 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 TEAD4Q15561 434 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 SLC14A2Q15849 920 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 SHQ1Q6PI26 577 aaKnown RBP15.31■□□□□ 0.04
RECQL4-209ENST00000617875 TSPYL5Q86VY4 417 aaPredicted RBP15.31■□□□□ 0.04
RECQL4-209ENST00000617875 ALDH16A1Q8IZ83 802 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 TEX47Q8TBZ9 253 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 GLYATL1Q969I3 302 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 TRIM63Q969Q1 353 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 ZNF607Q96SK3 696 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 CPPED1Q9BRF8 314 aaPredicted RBP15.31■□□□□ 0.04
RECQL4-209ENST00000617875 OR1A2Q9Y585 309 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 CCDC88CQ9P219 2028 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 PIKFYVEQ9Y2I7 2098 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 TET1Q8NFU7 2136 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 SPNP16150 400 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 CTF1Q16619 201 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 OR14C36Q8NHC7 312 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 ZFP3Q96NJ6 502 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 TMEM106CQ9BVX2 250 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 SERHL2Q9H4I8 314 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 SERHLQ9NQF3 203 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 FAM120CQ9NX05 1096 aaKnown RBP15.31■□□□□ 0.04
RECQL4-209ENST00000617875 STMN3Q9NZ72 180 aa15.31■□□□□ 0.04
RECQL4-209ENST00000617875 PDPK1O15530 556 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 SSX4O60224 188 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 ETHE1O95571 254 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 CPNE6O95741 557 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 PPIBP23284 216 aaKnown RBP15.3■□□□□ 0.04
RECQL4-209ENST00000617875 RGS8P57771 180 aaPredicted RBP15.3■□□□□ 0.04
RECQL4-209ENST00000617875 SELENBP1Q13228 472 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 DPY19L1Q2PZI1 675 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 PRSS48Q7RTY5 328 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 LAPTM4BQ86VI4 370 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 AIF1LQ9BQI0 150 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 HDHD5Q9BXW7 423 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 CREBZFQ9NS37 354 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 KCNK5O95279 499 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 SAGP10523 405 aaPredicted RBP15.3■□□□□ 0.04
RECQL4-209ENST00000617875 CR2P20023 1033 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 TIE1P35590 1138 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 GABARAPL2P60520 117 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 GPR68Q15743 365 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 B3GNT7Q8NFL0 401 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 GPR151Q8TDV0 419 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 GATAD2BQ8WXI9 593 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 IRF7Q92985 503 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 MAGEB10Q96LZ2 347 aaPredicted RBP15.3■□□□□ 0.04
RECQL4-209ENST00000617875 SLC12A9Q9BXP2 914 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 GORASP2Q9H8Y8 452 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 PRSS23O95084 383 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 TIA1P31483 386 aaKnown RBP eCLIP15.3■□□□□ 0.04
RECQL4-209ENST00000617875 HYAL2Q12891 473 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 HSDL2Q6YN16 418 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 LUZP2Q86TE4 346 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 AMZ2Q86W34 360 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 MSRB3Q8IXL7 192 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 SMG7Q92540 1137 aaKnown RBP15.3■□□□□ 0.04
RECQL4-209ENST00000617875 USP7Q93009 1102 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 TMCO6Q96DC7 493 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 REEP4Q9H6H4 257 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 FZD3Q9NPG1 666 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 IL36AQ9UHA7 158 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 FBXO10Q9UK96 956 aa15.3■□□□□ 0.04
RECQL4-209ENST00000617875 CELP19835 753 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 GAB1Q13480 694 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 ATAT1Q5SQI0 421 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 PAMR1Q6UXH9 720 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 PLEKHM3Q6ZWE6 761 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 RBM45Q8IUH3 476 aaKnown RBP15.29■□□□□ 0.04
RECQL4-209ENST00000617875 LYSMD2Q8IV50 215 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 OR8D1Q8WZ84 308 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 NEDD4LQ96PU5 975 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 SNX7Q9UNH6 387 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 CORO2BQ9UQ03 480 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 HCN4Q9Y3Q4 1203 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 ZNF638Q14966 1978 aaKnown RBP15.29■□□□□ 0.04
RECQL4-209ENST00000617875 ZSCAN5BA6NJL1 495 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 AP3D1O14617 1153 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 GABARAPO95166 117 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 CLTBP09497 229 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 VIPR1P32241 457 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 RORCP51449 518 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 TUBA1BP68363 451 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 PRSS36Q5K4E3 855 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 TUBA1AQ71U36 451 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 CYP4Z2PQ8N1L4 340 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 MINDY2Q8NBR6 621 aa15.29■□□□□ 0.04
RECQL4-209ENST00000617875 C11orf24Q96F05 449 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms