RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 CDK9P50750 372 aaKnown RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 MVDP53602 400 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 CRYBA2P53672 197 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 CHRNB3Q05901 458 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 KLC1Q07866 573 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 ABHD18Q0P651 414 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 VMACQ2NL98 169 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 ANXA8L1Q5VT79 327 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 NKAIN2Q5VXU1 208 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 FCRL6Q6DN72 434 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 ABHD17CQ6PCB6 329 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 FKBP9P1Q75LS8 142 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 WDR53Q7Z5U6 358 aaPredicted RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 TMEM179BQ7Z7N9 219 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 SMYD1Q8NB12 490 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 REXO5Q96IC2 774 aaKnown RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 NECAB3Q96P71 396 aaPredicted RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 MAPKAP1Q9BPZ7 522 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 RAB11FIP5Q9BXF6 653 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 GSDMCQ9BYG8 508 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 BHLHE41Q9C0J9 482 aaPredicted RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 FAM60AQ9NP50 221 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 TAS2R9Q9NYW1 312 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 WNT16Q9UBV4 365 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 PADI4Q9UM07 663 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 MRPS17Q9Y2R5 130 aaKnown RBP7.4□□□□□ -1.23
NEK3-207ENST00000617054 SIT1Q9Y3P8 196 aa7.4□□□□□ -1.23
NEK3-207ENST00000617054 C10orf142B7Z368 130 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 DLGAP1O14490 977 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 GNGT2O14610 69 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 GCM2O75603 506 aaPredicted RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 BMP2P12643 396 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 FUT4P22083 530 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 HIST1H1TP22492 207 aaPredicted RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 ID2Q02363 134 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 PDE7AQ13946 482 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 PDK3Q15120 406 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 FAM98BQ52LJ0 330 aaKnown RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 ZNF425Q6IV72 752 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 FIGLAQ6QHK4 219 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 PRR23BQ6ZRT6 265 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 ADHFE1Q8IWW8 467 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 FAM47BQ8NA70 645 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 SIMC1Q8NDZ2 872 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 PJA1Q8NG27 643 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 TMBIM1Q969X1 311 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 COL26A1Q96A83 441 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 CENPNQ96H22 339 aaPredicted RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 BARD1Q99728 777 aaKnown RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 SMURF2Q9HAU4 748 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 ATAD3AQ9NVI7 634 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 ABCG2Q9UNQ0 655 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 DOLKQ9UPQ8 538 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 AP1M2Q9Y6Q5 423 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 TTC28Q96AY4 2481 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 LRP4O75096 1905 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 A0A0A6YYD5 115 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 OR2W5A6NFC9 320 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 FAM220BPB1ANY3 271 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 TLR4O00206 839 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 CLOCKO15516 846 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 CLEC3AO75596 197 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 LDLRP01130 860 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 RAP2AP10114 183 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 ATP5A1P25705 553 aaKnown RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 TP53BP2Q13625 1128 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 SLC9A5Q14940 896 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 HEPACAMQ14CZ8 416 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 RPS26P11Q5JNZ5 115 aaPredicted RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 TMTC4Q5T4D3 741 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 FAM92BQ6ZTR7 304 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 PAGE2Q7Z2X7 111 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 R3HCC1LQ7Z5L2 792 aaKnown RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 STK32CQ86UX6 486 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 PAQR7Q86WK9 346 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 OR5T3Q8NGG3 340 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 OR5D16Q8NGK9 328 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 NFKBIDQ8NI38 313 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 GATA6Q92908 595 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 METTL2AQ96IZ6 378 aaKnown RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 TM9SF3Q9HD45 589 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 BTNL2Q9UIR0 455 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 RP1P56715 2156 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 ARID1BQ8NFD5 2236 aaPredicted RBP7.39□□□□□ -1.23
NEK3-207ENST00000617054 A0A1W2PPC1 479 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 UPK1AO00322 258 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 SNAP29O95721 258 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 LYNP07948 512 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 CD27P26842 260 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 NDUFS1P28331 727 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 ALDH4A1P30038 563 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 KDELR2P33947 212 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 PRIM2P49643 509 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 RGS19P49795 217 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 C21orf58P58505 322 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 BNIP3Q12983 259 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 CAMKMTQ7Z624 323 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 SERPINA11Q86U17 422 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 OFCC1Q8IZS5 231 aa7.39□□□□□ -1.23
NEK3-207ENST00000617054 ANKFN1Q8N957 763 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms