RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 DDI2Q5TDH0 399 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 GDF6Q6KF10 455 aaPredicted RBP12.6□□□□□ -0.39
MSH6-214ENST00000616033 OR4M1Q8NGD0 313 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 RAB8BQ92930 207 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 TADA1Q96BN2 335 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 P2RY12Q9H244 342 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 TRPS1Q9UHF7 1281 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 AP3M1Q9Y2T2 418 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 PCDHB11Q9Y5F2 797 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 GREB1Q4ZG55 1949 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 HTTP42858 3142 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 TRBV4-1A0A0J9YWV2 114 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 PRAMEF25A6NGN4 478 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 HBQ1P09105 142 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 CLCN4P51793 760 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 CTBP2P56545 445 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 SELENOWP63302 87 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 NAE1Q13564 534 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 GNA13Q14344 377 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 POM121L1PQ3SYA9 428 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 MTFR2Q6P444 385 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 ERICH5Q6P6B1 374 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 CD300LGQ6UXG3 332 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 LHFPL3Q86UP9 236 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 SLC51BQ86UW2 128 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 USP7Q93009 1102 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 SLC35A5Q9BS91 424 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 TSSK6Q9BXA6 273 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 TRPV2Q9Y5S1 764 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 DOCK4Q8N1I0 1966 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 C2orf92A0A1B0GVN3 265 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 WASHC1A8K0Z3 465 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 SMAD6O43541 496 aaKnown RBP12.59□□□□□ -0.39
MSH6-214ENST00000616033 ETHE1O95571 254 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 CH25HO95992 272 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 ZNF865P0CJ78 1059 aaPredicted RBP12.59□□□□□ -0.39
MSH6-214ENST00000616033 GPX2P18283 190 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 CORO1AP31146 461 aaKnown RBP12.59□□□□□ -0.39
MSH6-214ENST00000616033 SOX9P48436 509 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 CRISP1P54107 249 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 WNT3P56703 355 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 FGFBP1Q14512 234 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 MPPE1Q53F39 396 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 CNIH2Q6PI25 160 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 IL20RBQ6UXL0 311 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 RBM45Q8IUH3 476 aaKnown RBP12.59□□□□□ -0.39
MSH6-214ENST00000616033 BEST4Q8NFU0 473 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 OR52P1PQ8NH57 321 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 AKAP1Q92667 903 aaKnown RBP eCLIP12.59□□□□□ -0.39
MSH6-214ENST00000616033 WBP2Q969T9 261 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 EPYCQ99645 322 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 P2RY13Q9BPV8 354 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 AIFM2Q9BRQ8 373 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 MIXL1Q9H2W2 232 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 VPS29Q9UBQ0 182 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 C2orf78A6NCI8 922 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 PDE9AO76083 593 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 ERP29P30040 261 aaKnown RBP12.59□□□□□ -0.39
MSH6-214ENST00000616033 SLC11A2P49281 568 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 HBA1P69905 142 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 LSM11P83369 360 aaKnown RBP eCLIP12.59□□□□□ -0.39
MSH6-214ENST00000616033 CSTF1Q05048 431 aaKnown RBP12.59□□□□□ -0.39
MSH6-214ENST00000616033 TARDBPQ13148 414 aaKnown RBP eCLIP12.59□□□□□ -0.393e-8■■■■■ 32.2
MSH6-214ENST00000616033 DUSP7Q16829 419 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 TTLL9Q3SXZ7 439 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 FRMPD2BQ6IN97 320 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 RIPOR3Q96MK2 946 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 NELL2Q99435 816 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 PKMYT1Q99640 499 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 NTMT1Q9BV86 223 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 SGK2Q9HBY8 427 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 CYB5R1Q9UHQ9 305 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 RIMKLBQ9ULI2 386 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 PCDHB1Q9Y5F3 818 aa12.59□□□□□ -0.39
MSH6-214ENST00000616033 PIPSLA2A3N6 862 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 FADS2P1A8MWK0 482 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 TGFB1P01137 390 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 CCR7P32248 378 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 GSTM5P46439 218 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 CSNK1DP48730 415 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 ALDH9A1P49189 494 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 RPS25P62851 125 aaKnown RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 MMP21Q8N119 569 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 DENND6BQ8NEG7 585 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 LILRB1Q8NHL6 650 aaPredicted RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 KLHL6Q8WZ60 621 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 FBXW5Q969U6 566 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 CMTM7Q96FZ5 175 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 MYO19Q96H55 970 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 DPCDQ9BVM2 203 aaPredicted RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 GABARAPL3Q9BY60 117 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 MAGEH1Q9H213 219 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 TXNL4BQ9NX01 149 aaKnown RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 NPAP1Q9NZP6 1156 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 IGLV3-10A0A075B6K4 115 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 E7EQ34 232 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 FABP7O15540 132 aa12.58□□□□□ -0.4
MSH6-214ENST00000616033 GCM2O75603 506 aaPredicted RBP12.58□□□□□ -0.4
MSH6-214ENST00000616033 BPIP17213 487 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms