RNA–Protein interactions for RNA: ENST00000612927.1

PCDHGA4-202, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA4, Length 2,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-202ENST00000612927 ABHD18Q0P651 414 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 TOR1AIP1Q5JTV8 583 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 NRARPQ7Z6K4 114 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 GPR156Q8NFN8 814 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 WDR20Q8TBZ3 569 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 SLC30A2Q9BRI3 323 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 CCM2Q9BSQ5 444 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 COPS4Q9BT78 406 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 VPS29Q9UBQ0 182 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 ABCG2Q9UNQ0 655 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 COL4A3Q01955 1670 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 EDDM13A0A1B0GTR0 161 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 MAGEB17A8MXT2 336 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 IMPA1P29218 277 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 ERVK-21P61565 698 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 TSTA3Q13630 321 aaPredicted RBP12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 ZNF234Q14588 700 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 DUSP6Q16828 381 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 ZNF621Q6ZSS3 439 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 ZDHHC21Q8IVQ6 265 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 FAM20CQ8IXL6 584 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 SLC38A6Q8IZM9 456 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 CADM2Q8N3J6 435 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 GIMAP1Q8WWP7 306 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 OR8D1Q8WZ84 308 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 MYDGFQ969H8 173 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 SH3KBP1Q96B97 665 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 SAMD11Q96NU1 681 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 FAM129BQ96TA1 746 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 GULP1Q9UBP9 304 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 CFL2Q9Y281 166 aa12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 YBX2Q9Y2T7 364 aaKnown RBP12.09□□□□□ -0.47
PCDHGA4-202ENST00000612927 MEIOCA2RUB1 952 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 CLIC1O00299 241 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 SCN2BO60939 215 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 SLITRK5O94991 958 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 LAMP1P11279 417 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 ENGP17813 658 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 PRPS1L1P21108 318 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 CTAG1AP78358 180 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 GPLD1P80108 840 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 ACSM2AQ08AH3 577 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 MTAPQ13126 283 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 DUOXA1Q1HG43 343 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 CCNJQ5T5M9 372 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 MLIPQ5VWP3 458 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 LIPJQ5W064 366 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 ACSM2BQ68CK6 577 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 VTCN1Q7Z7D3 282 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 C1orf52Q8N6N3 182 aaKnown RBP12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 TMIEQ8NEW7 156 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 DNAJB8Q8NHS0 232 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 PKP4Q99569 1192 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 SGK2Q9HBY8 427 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 PLCXD1Q9NUJ7 323 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 KCNN3Q9UGI6 736 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 A0A075B6Q4 140 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 E9PQ18 207 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 hCG_2039718K7EN88 272 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 ARHGAP33O14559 1287 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 AP3D1O14617 1153 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 NPC1O15118 1278 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 MMP20O60882 483 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 C6P13671 934 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 ADRB3P13945 408 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 FPR1P21462 350 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 FCARP24071 287 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 DNAJA1P31689 397 aaKnown RBP12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 OR3A3P47888 321 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 OLR1P78380 273 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 IL1RL1Q01638 556 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 CSTF3Q12996 717 aaKnown RBP12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 TARDBPQ13148 414 aaKnown RBP eCLIP12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 GTF2H3Q13889 308 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 ZNF658BQ4V348 819 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 OR2T5Q6IEZ7 315 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 IDO2Q6ZQW0 420 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 NLRP8Q86W28 1048 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 LIX1LQ8IVB5 337 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 FAM9CQ8IZT9 166 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 OR2T29Q8NH02 315 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 SLC7A6Q92536 515 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 NUS1Q96E22 293 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 FCRL1Q96LA6 429 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 CEP19Q96LK0 163 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 SFXN1Q9H9B4 322 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 TRIM39Q9HCM9 518 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 SPATA6Q9NWH7 488 aaPredicted RBP12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 VPS4AQ9UN37 437 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 SH2B3Q9UQQ2 575 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 LRRK1Q38SD2 2015 aa12.08□□□□□ -0.48
PCDHGA4-202ENST00000612927 NPIPB8E9PQR5 432 aa12.07□□□□□ -0.48
PCDHGA4-202ENST00000612927 POLR1CO15160 346 aaPredicted RBP12.07□□□□□ -0.48
PCDHGA4-202ENST00000612927 CATP04040 527 aaKnown RBP12.07□□□□□ -0.48
PCDHGA4-202ENST00000612927 PBX2P40425 430 aa12.07□□□□□ -0.48
PCDHGA4-202ENST00000612927 HTR2BP41595 481 aa12.07□□□□□ -0.48
PCDHGA4-202ENST00000612927 KCNC3Q14003 757 aa12.07□□□□□ -0.48
PCDHGA4-202ENST00000612927 ELAVL3Q14576 367 aaKnown RBP12.07□□□□□ -0.48
PCDHGA4-202ENST00000612927 HKDC1Q2TB90 917 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms