RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CADM2Q8N3J6 435 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 EFHD2Q96C19 240 aaPredicted RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 PIP5K1AQ99755 562 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 KCNK12Q9HB15 430 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 LSM7Q9UK45 103 aaKnown RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 ABT1Q9ULW3 272 aaKnown RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 KCNE2Q9Y6J6 123 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 MEIOCA2RUB1 952 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 FFAR1O14842 300 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 CSO75390 466 aaKnown RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 IFNW1P05000 195 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 GSTM1P09488 218 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 PCGF2P35227 344 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 RFX2P48378 723 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 TBPL1P62380 186 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 SPHARQ15513 63 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 PLAG1Q6DJT9 500 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 SLC8B1Q6J4K2 584 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 ATCAYQ86WG3 371 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 NPAS4Q8IUM7 802 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 ASB15Q8WXK1 588 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 EXOSC8Q96B26 276 aaKnown RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 ART5Q96L15 291 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 MACROD1Q9BQ69 325 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 GFYI3L273 518 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 SEMA3DO95025 777 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 TSPAN19P0C672 248 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 IL7P13232 177 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 MAP4K2Q12851 820 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 PUM1Q14671 1186 aaKnown RBP eCLIP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 GRIN2CQ14957 1233 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 PDZK1Q5T2W1 519 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 LYPD8Q6UX82 237 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.48■□□□□ 0.712e-6■■■□□ 17
SSBP3-216ENST00000610401 RASGEF1AQ8N9B8 481 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 OR5D16Q8NGK9 328 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 GATAD2BQ8WXI9 593 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 SLC6A16Q9GZN6 736 aa19.48■□□□□ 0.71
SSBP3-216ENST00000610401 SPATA6Q9NWH7 488 aaPredicted RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 SPIN1Q9Y657 262 aaPredicted RBP19.48■□□□□ 0.71
SSBP3-216ENST00000610401 A0A1W2PQ45 241 aaPredicted RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 A0A1W2PQL4 384 aaPredicted RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 A0A1W2PQY0 241 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 M0R3H8 397 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 SCAMP1O15126 338 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 CBSLP0DN79 551 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 PSMA1P25786 263 aaKnown RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 CBSP35520 551 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 RNF144AP50876 292 aaPredicted RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 ATAT1Q5SQI0 421 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 CASP12Q6UXS9 341 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 GAREM2Q75VX8 874 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 CCDC190Q86UF4 302 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 TP53I13Q8NBR0 393 aaPredicted RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 XAGE5Q8WWM1 108 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 TRPC4Q9UBN4 977 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 ZNF282Q9UDV7 671 aaPredicted RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 MKLN1Q9UL63 735 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 LEFTY1O75610 366 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 HBQ1P09105 142 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 GABRB1P18505 474 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 RECQLP46063 649 aaPredicted RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 ELAVL2Q12926 359 aaKnown RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 TEAD4Q15561 434 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 ZNF544Q6NX49 715 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 QRSL1Q9H0R6 528 aaKnown RBP19.47■□□□□ 0.71
SSBP3-216ENST00000610401 TMCC3Q9ULS5 477 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 GON4LQ3T8J9 2241 aa19.47■□□□□ 0.71
SSBP3-216ENST00000610401 MYL12BO14950 172 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 FRS3O43559 492 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 CXCR2P25025 360 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 ZNF79Q15937 498 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 LIPJQ5W064 366 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 MED27Q6P2C8 311 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 ASCC1Q8N9N2 400 aaKnown RBP19.46■□□□□ 0.71
SSBP3-216ENST00000610401 LILRB4Q8NHJ6 448 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 ZNF480Q8WV37 535 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 TSSK6Q9BXA6 273 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 CHST8Q9H2A9 424 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 REEP4Q9H6H4 257 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 GIMAP4Q9NUV9 329 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 ITGB1BP2Q9UKP3 347 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 GSAPA4D1B5 854 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 FABP12A6NFH5 140 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 ZNF197O14709 1029 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 CATP04040 527 aaKnown RBP19.46■□□□□ 0.71
SSBP3-216ENST00000610401 SDC2P34741 201 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 OPRD1P41143 372 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 OLR1P78380 273 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 GGTA1PQ4G0N0 100 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 MPPE1Q53F39 396 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 ANXA8L1Q5VT79 327 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 FAM20CQ8IXL6 584 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 OR4C15Q8NGM1 316 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 ARMC5Q96C12 935 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 SLX1AQ9BQ83 275 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 RACGAP1Q9H0H5 632 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 MVB12BQ9H7P6 319 aa19.46■□□□□ 0.71
SSBP3-216ENST00000610401 OR6C70A6NIJ9 312 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms