RNA–Protein interactions for RNA: ENST00000594243.1

UPF1-202, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-202ENST00000594243 HOMEZQ8IX15 550 aa14.11□□□□□ -0.15
UPF1-202ENST00000594243 M1APQ8TC57 530 aa14.11□□□□□ -0.15
UPF1-202ENST00000594243 AGAP11Q8TF27 550 aa14.11□□□□□ -0.15
UPF1-202ENST00000594243 PGM2Q96G03 612 aa14.11□□□□□ -0.15
UPF1-202ENST00000594243 CNDP1Q96KN2 507 aa14.11□□□□□ -0.15
UPF1-202ENST00000594243 SORBS1Q9BX66 1292 aaKnown RBP14.11□□□□□ -0.15
UPF1-202ENST00000594243 NECTIN3Q9NQS3 549 aa14.11□□□□□ -0.15
UPF1-202ENST00000594243 FARSBQ9NSD9 589 aaKnown RBP14.11□□□□□ -0.15
UPF1-202ENST00000594243 LYARQ9NX58 379 aaKnown RBP14.11□□□□□ -0.15
UPF1-202ENST00000594243 ANAPC2Q9UJX6 822 aa14.11□□□□□ -0.15
UPF1-202ENST00000594243 FBXW2Q9UKT8 454 aa14.11□□□□□ -0.15
UPF1-202ENST00000594243 IGKV3D-11A0A0A0MRZ8 115 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 ARHGAP10A1A4S6 786 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 MANBAO00462 879 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 TYROBPO43914 113 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 BUD31P41223 144 aaPredicted RBP14.1□□□□□ -0.15
UPF1-202ENST00000594243 STX4Q12846 297 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 CSTF3Q12996 717 aaKnown RBP14.1□□□□□ -0.15
UPF1-202ENST00000594243 BIKQ13323 160 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 CRB2Q5IJ48 1285 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 PAPD4Q6PIY7 484 aaKnown RBP14.1□□□□□ -0.15
UPF1-202ENST00000594243 IGFL3Q6UXB1 125 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 ZNF605Q86T29 641 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 EXOC3L1Q86VI1 746 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 SCUBE1Q8IWY4 988 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 GBP7Q8N8V2 638 aaPredicted RBP14.1□□□□□ -0.15
UPF1-202ENST00000594243 LMF1Q96S06 567 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 WDR77Q9BQA1 342 aaPredicted RBP14.1□□□□□ -0.15
UPF1-202ENST00000594243 STMN4Q9H169 189 aaPredicted RBP14.1□□□□□ -0.15
UPF1-202ENST00000594243 EPS8L2Q9H6S3 715 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 SSU72Q9NP77 194 aaKnown RBP14.1□□□□□ -0.15
UPF1-202ENST00000594243 SLC17A7Q9P2U7 560 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 VPS29Q9UBQ0 182 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 ADAM29Q9UKF5 820 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 SLC12A4Q9UP95 1085 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 NUP210LQ5VU65 1888 aa14.1□□□□□ -0.15
UPF1-202ENST00000594243 A0A0A6YYD5 115 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 SERTM1A2A2V5 107 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 UBFD1O14562 309 aaKnown RBP14.09□□□□□ -0.15
UPF1-202ENST00000594243 CRCPO75575 148 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 UQCRHP07919 91 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 FAM58BPP0C7Q3 252 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 CREB1P16220 341 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 ALDH3A1P30838 453 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 HNRNPFP52597 415 aaKnown RBP14.09□□□□□ -0.15
UPF1-202ENST00000594243 SERTAD2Q14140 314 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 TNFAIP8L3Q5GJ75 292 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 MRM1Q6IN84 353 aaKnown RBP14.09□□□□□ -0.15
UPF1-202ENST00000594243 ISLR2Q6UXK2 745 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 METTL4Q8N3J2 472 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 ZADH2Q8N4Q0 377 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 EFCAB3Q8N7B9 438 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 TMEM52Q8NDY8 209 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 TANKQ92844 425 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 CSF3RQ99062 836 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 TRMOQ9BU70 441 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 GATA5Q9BWX5 397 aaPredicted RBP14.09□□□□□ -0.15
UPF1-202ENST00000594243 ZNF717Q9BY31 904 aaPredicted RBP14.09□□□□□ -0.15
UPF1-202ENST00000594243 RPF2Q9H7B2 306 aaKnown RBP14.09□□□□□ -0.15
UPF1-202ENST00000594243 WDR41Q9HAD4 459 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 MMP25Q9NPA2 562 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 TIMM22Q9Y584 194 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 ACTL7BQ9Y614 415 aa14.09□□□□□ -0.15
UPF1-202ENST00000594243 GOLGA6L10A6NI86 522 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 SUV39H1O43463 412 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 PROM1O43490 865 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 NPHS1O60500 1241 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 GUCY1B2O75343 617 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 EEDO75530 441 aaKnown RBP14.08□□□□□ -0.16
UPF1-202ENST00000594243 KLK1P06870 262 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 UROSP10746 265 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 ITGAMP11215 1152 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 PPP2R1BP30154 601 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 SLC26A5P58743 744 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 TNFRSF17Q02223 184 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 TERF2Q15554 542 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 TCHHL1Q5QJ38 904 aaPredicted RBP14.08□□□□□ -0.16
UPF1-202ENST00000594243 CCNYL2Q5T2Q4 361 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 IGFL2Q6UWQ7 119 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 BRIX1Q8TDN6 353 aaKnown RBP14.08□□□□□ -0.16
UPF1-202ENST00000594243 PSMF1Q92530 271 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 MRPL1Q9BYD6 325 aaKnown RBP14.08□□□□□ -0.16
UPF1-202ENST00000594243 ALOXE3Q9BYJ1 711 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 KCNK13Q9HB14 408 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 PTGFRNQ9P2B2 879 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 VTI1BQ9UEU0 232 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 TEKT2Q9UIF3 430 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 ATG4BQ9Y4P1 393 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 ASB4Q9Y574 426 aa14.08□□□□□ -0.16
UPF1-202ENST00000594243 SAGE2PA6NJ88 616 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 A8MUA0 341 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 TM9SF1O15321 606 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 TMPRSS11DO60235 418 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 LDB3O75112 727 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 GBAP04062 536 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 IFNA16P05015 189 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 CELA2AP08217 269 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 SERPINB5P36952 375 aa14.07□□□□□ -0.16
UPF1-202ENST00000594243 HNRNPH2P55795 449 aaKnown RBP14.07□□□□□ -0.16
UPF1-202ENST00000594243 GALNT1Q10472 559 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms