RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 GATAD2BQ8WXI9 593 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF707Q96C28 371 aaPredicted RBP14.53□□□□□ -0.08
CIRBP-228ENST00000590347 SENP5Q96HI0 755 aaPredicted RBP14.53□□□□□ -0.08
CIRBP-228ENST00000590347 FCRL2Q96LA5 508 aaPredicted RBP14.53□□□□□ -0.08
CIRBP-228ENST00000590347 C1orf74Q96LT6 269 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 C12orf66Q96MD2 445 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 SLC2A13Q96QE2 648 aa14.53□□□□□ -0.08
CIRBP-228ENST00000590347 TMEM121BQ9BXQ6 578 aaPredicted RBP14.53□□□□□ -0.08
CIRBP-228ENST00000590347 CD79BP40259 229 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 UNC5DQ6UXZ4 953 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 GPALPP1Q8IXQ4 340 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 SCAMP5Q8TAC9 235 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 WDR48Q8TAF3 677 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 HMGB4Q8WW32 186 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 TM9SF4Q92544 642 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 PTP4A1Q93096 173 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 APOLD1Q96LR9 279 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 ZNF578Q96N58 590 aaPredicted RBP14.52□□□□□ -0.08
CIRBP-228ENST00000590347 PKMYT1Q99640 499 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 PIGUQ9H490 435 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 TBC1D17Q9HA65 648 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 TNFRSF10DQ9UBN6 386 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 TRBV5-3A0A0A0MS03 114 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 RAB19A4D1S5 217 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 SSNA1O43805 119 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 GMDSO60547 372 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 MMP3P08254 477 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 HOXB3P14651 431 aaPredicted RBP14.52□□□□□ -0.08
CIRBP-228ENST00000590347 STOMP27105 288 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 STC1P52823 247 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 ITGA1P56199 1179 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 ABHD18Q0P651 414 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 PAN2Q504Q3 1202 aaKnown RBP14.52□□□□□ -0.08
CIRBP-228ENST00000590347 PSAPL1Q6NUJ1 521 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 RETSATQ6NUM9 610 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 HMCESQ96FZ2 354 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 SMOQ99835 787 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 TMEM175Q9BSA9 504 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 SHARPINQ9H0F6 387 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 CLMPQ9H6B4 373 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 PLCXD1Q9NUJ7 323 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 KCTD5Q9NXV2 234 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 OR6C2Q9NZP2 312 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 MRPL15Q9P015 296 aaKnown RBP14.52□□□□□ -0.08
CIRBP-228ENST00000590347 MAB21L2Q9Y586 359 aa14.52□□□□□ -0.08
CIRBP-228ENST00000590347 DOCK3Q8IZD9 2030 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 HRO43593 1189 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 CACNG3O60359 315 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 ULK1O75385 1050 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 SLC43A1O75387 559 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 ANXA3P12429 323 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 CDKL4Q5MAI5 379 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 PTOV1Q86YD1 416 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 ZFP82Q8N141 532 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 AQP11Q8NBQ7 271 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 TMEM40Q8WWA1 233 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 KLHL6Q8WZ60 621 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 AP2M1Q96CW1 435 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 ZSWIM3Q96MP5 696 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 WDFY2Q96P53 400 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 ZNF382Q96SR6 550 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 DDOQ99489 341 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 SEMA3CQ99985 751 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 TMED9Q9BVK6 235 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 DERL2Q9GZP9 239 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 ESRP2Q9H6T0 727 aaKnown RBP14.52□□□□□ -0.09
CIRBP-228ENST00000590347 SH3BP4Q9P0V3 963 aa14.52□□□□□ -0.09
CIRBP-228ENST00000590347 HYKKA2RU49 373 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 OR2W5A6NFC9 320 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 H3BN98 237 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 FPGTO14772 594 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 GPR182O15218 404 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 EEF1E1O43324 174 aaKnown RBP14.51□□□□□ -0.09
CIRBP-228ENST00000590347 RECQL4O94761 1208 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 IL6P05231 212 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 SOX18P35713 384 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 PLEKHH3Q7Z736 793 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 UNC93AQ86WB7 457 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 PAQR7Q86WK9 346 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 DNAJB8Q8NHS0 232 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 UFD1Q92890 307 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 UCN3Q969E3 161 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 MYLPFQ96A32 169 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 OTULINQ96BN8 352 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 C7orf34Q96L11 122 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 GABARAPL3Q9BY60 117 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 NMRK2Q9NPI5 230 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 NANSQ9NR45 359 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 CLN6Q9NWW5 311 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 DPP7Q9UHL4 492 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 PRELID3BQ9Y3B1 194 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 IQCMA0A1B0GVH7 501 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 LOC730098B7Z3J9 87 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 SUV39H1O43463 412 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 PIP5K1CO60331 668 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 TPST2O60704 377 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 TFPIP10646 304 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 HLA-EP13747 358 aa14.51□□□□□ -0.09
CIRBP-228ENST00000590347 RPS14P62263 151 aaKnown RBP14.51□□□□□ -0.09
CIRBP-228ENST00000590347 CSNK2BP67870 215 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms