RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 SLCO2A1Q92959 643 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 MS4A6EQ96DS6 147 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF703Q9H7S9 590 aaPredicted RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 LIN28AQ9H9Z2 209 aaKnown RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 SH2D2AQ9NP31 389 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 DMRT3Q9NQL9 472 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 SACM1LQ9NTJ5 587 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 SPRR3Q9UBC9 169 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 VTI1BQ9UEU0 232 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 CORO1CQ9ULV4 474 aaPredicted RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 MRPS33Q9Y291 106 aaKnown RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 DYRK1BQ9Y463 629 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 ATG4BQ9Y4P1 393 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 MAD1L1Q9Y6D9 718 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 LRIT2A6NDA9 550 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 PABPN1LA6NDY0 278 aaKnown RBP13.05□□□□□ -0.32
CXXC1-208ENST00000587170 AHSGP02765 367 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 CCL3P10147 92 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 PGAM1P18669 254 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 ASCL1P50553 236 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 RNF4P78317 190 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 BTN3A2P78410 334 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 CDKL1Q00532 357 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 LTBQ06643 244 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF750Q32MQ0 723 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 OPN5Q6U736 354 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 SEM1Q6ZVN7 128 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 WDR53Q7Z5U6 358 aaPredicted RBP13.05□□□□□ -0.32
CXXC1-208ENST00000587170 KLHDC8AQ8IYD2 350 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 FBXW8Q8N3Y1 598 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 FAM47BQ8NA70 645 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 TTLQ8NG68 377 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 DAZLQ92904 295 aaKnown RBP13.05□□□□□ -0.32
CXXC1-208ENST00000587170 CNPPD1Q9BV87 410 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 TUBA8Q9NY65 449 aaPredicted RBP13.05□□□□□ -0.32
CXXC1-208ENST00000587170 IKZF3Q9UKT9 509 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 ACAD8Q9UKU7 415 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 KCNE2Q9Y6J6 123 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 CLCA3PQ9Y6N3 262 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 MED12Q93074 2177 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 HEATR5AQ86XA9 2040 aa13.05□□□□□ -0.32
CXXC1-208ENST00000587170 A0A088AWK7 358 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 TRGV5A0A0B4J1U4 118 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 HSPB2A8KAH6 182 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 ERI3O43414 337 aaKnown RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 B3GALT2O43825 422 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 CTNSO60931 367 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 GOSR1O95249 250 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 TTC4O95801 387 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 GUCA1CO95843 209 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 RAF1P04049 648 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF10P21506 573 aaPredicted RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 HOXC12P31275 282 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 DNASE1L1P49184 302 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 PDAP1Q13442 181 aaKnown RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 SLC10A1Q14973 349 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 RBBP5Q15291 538 aaKnown RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 HSPB2Q16082 182 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 MPEG1Q2M385 716 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 DEFB113Q30KQ7 82 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 POMZP3Q6PJE2 187 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 SLCO4C1Q6ZQN7 724 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF662Q6ZS27 426 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 FAM47EQ6ZV65 393 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 KRTAP1-3Q8IUG1 177 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 ULK2Q8IYT8 1036 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 LRRC25Q8N386 305 aaPredicted RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF321PQ8N8H1 164 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 OR2L5Q8NG80 312 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 GOT1L1Q8NHS2 421 aaPredicted RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 GABPB2Q8TAK5 448 aaPredicted RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 ANKRD7Q92527 254 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 RNASE6Q93091 150 aaKnown RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 FAR2Q96K12 515 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 PWWP2AQ96N64 755 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 SERINC2Q96SA4 455 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 CSF3RQ99062 836 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 PITHD1Q9GZP4 211 aaPredicted RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 SEMA4BQ9NPR2 832 aaPredicted RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 FOXD3Q9UJU5 478 aaPredicted RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 DAPP1Q9UN19 280 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 SLC22A14Q9Y267 594 aa13.04□□□□□ -0.32
CXXC1-208ENST00000587170 FBN1P35555 2871 aaKnown RBP13.04□□□□□ -0.32
CXXC1-208ENST00000587170 A0A0G2JN53 185 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 ATP6AP2A0A1C7CYW4 349 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 LRRC3CA6NJW4 275 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 NRDCO43847 1150 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 CLEC3AO75596 197 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 ATP6AP2O75787 350 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 P04436 131 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF37AP17032 561 aaPredicted RBP13.03□□□□□ -0.32
CXXC1-208ENST00000587170 GNAZP19086 355 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 UQCRC1P31930 480 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 CEACAM8P31997 349 aaPredicted RBP13.03□□□□□ -0.32
CXXC1-208ENST00000587170 SLC6A12P48065 614 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 DGKQP52824 942 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 PGGT1BP53609 377 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 LIM2P55344 173 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 BMPR2Q13873 1038 aa13.03□□□□□ -0.32
CXXC1-208ENST00000587170 SNTB1Q13884 538 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms