RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SCAMP2O15127 329 aaKnown RBP11.98□□□□□ -0.49
VMP1-202ENST00000585847 KCNH1O95259 989 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 STAMBPO95630 424 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 ZNF28P17035 718 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 ITGAXP20702 1163 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 CAPN3P20807 821 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 S100A3P33764 101 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 SSR2P43308 183 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 MAPK12P53778 367 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 ARF3P61204 181 aaPredicted RBP11.98□□□□□ -0.49
VMP1-202ENST00000585847 UFM1P61960 85 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 GABREP78334 506 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 CYP4F3Q08477 520 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 RIPK1Q13546 671 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 PTGR1Q14914 329 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 MAPKAPK3Q16644 382 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 SPRED3Q2MJR0 410 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 PRTGQ2VWP7 1150 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 TIGD2Q4W5G0 525 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 TCTE1Q5JU00 501 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 GARNL3Q5VVW2 1013 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 C8orf82Q6P1X6 216 aaPredicted RBP11.98□□□□□ -0.49
VMP1-202ENST00000585847 IGF2-ASQ6U949 168 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 GK5Q6ZS86 529 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 POU5F2Q8N7G0 328 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 GOLM1Q8NBJ4 401 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 TNIP2Q8NFZ5 429 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.98□□□□□ -0.49
VMP1-202ENST00000585847 MTFMTQ96DP5 389 aaKnown RBP11.98□□□□□ -0.49
VMP1-202ENST00000585847 TM4SF19Q96DZ7 209 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 RNF31Q96EP0 1072 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 CTRCQ99895 268 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 SPRY4Q9C004 299 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 NRSN2Q9GZP1 204 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 REEP4Q9H6H4 257 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 COPS7BQ9H9Q2 264 aaPredicted RBP11.98□□□□□ -0.49
VMP1-202ENST00000585847 POLR1BQ9H9Y6 1135 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 ASCL3Q9NQ33 180 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 SLC52A3Q9NQ40 469 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 SLC39A1Q9NY26 324 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 GIMAP2Q9UG22 337 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 PHF11Q9UIL8 331 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 BTNL2Q9UIR0 455 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 PLCL2Q9UPR0 1127 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 DLGAP4Q9Y2H0 992 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 B3GALT1Q9Y5Z6 326 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 SLC22A7Q9Y694 548 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 SPACA6W5XKT8 324 aa11.98□□□□□ -0.49
VMP1-202ENST00000585847 ACACAQ13085 2346 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 LOC400499M0QZD8 3231 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 FITM1A5D6W6 292 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 CDRT15L2A8MXV6 281 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 TMEM150CB9EJG8 249 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 RNASET2O00584 256 aaKnown RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 PLPP1O14494 284 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 ETHE1O95571 254 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 TGFB1P01137 390 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 STATHP02808 62 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 ZCCHC18P0CG32 403 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 COX7A2P14406 83 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 DDCP20711 480 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 HIST1H1TP22492 207 aaPredicted RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 ARL4DP49703 201 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 MAPK10P53779 464 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 MTTPP55157 894 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 PSME3P61289 254 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 TXNL4AP83876 142 aaKnown RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 ACY1Q03154 408 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 KLC1Q07866 573 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 HYAL2Q12891 473 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 BNIP2Q12982 314 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 SLC9A5Q14940 896 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 NDUFA9Q16795 377 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 FAM174BQ3ZCQ3 159 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 VPS26BQ4G0F5 336 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 CCNYL2Q5T2Q4 361 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 TMTC4Q5T4D3 741 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 CPTPQ5TA50 214 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 YOD1Q5VVQ6 348 aaPredicted RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 OR4C11Q6IEV9 310 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 NET1Q7Z628 596 aaPredicted RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 DHDDSQ86SQ9 333 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 SCUBE1Q8IWY4 988 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 DEFB107AQ8IZN7 70 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 DTWD1Q8N5C7 304 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 TRIML2Q8N7C3 387 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 OR9I1Q8NGQ6 314 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 COQ8BQ96D53 544 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 SLC46A1Q96NT5 459 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 TSSK3Q96PN8 268 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 TAAR9Q96RI9 348 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 MACROD1Q9BQ69 325 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 GPATCH1Q9BRR8 931 aaKnown RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 SPATA9Q9BWV2 254 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 NPLQ9BXD5 320 aaPredicted RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 CADM1Q9BY67 442 aaKnown RBP11.97□□□□□ -0.49
VMP1-202ENST00000585847 OR51B5Q9H339 312 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 NEUROD4Q9HD90 331 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 MIEF1Q9NQG6 463 aa11.97□□□□□ -0.49
VMP1-202ENST00000585847 STARD5Q9NSY2 213 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms