RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 RBM12BQ8IXT5 1001 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 C1orf216Q8TAB5 229 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 GPBAR1Q8TDU6 330 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CAMK1GQ96NX5 476 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 TSSK3Q96PN8 268 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PANX1Q96RD7 426 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ANKHQ9HCJ1 492 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 WASH6PQ9NQA3 447 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 VPS29Q9UBQ0 182 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 BTNL2Q9UIR0 455 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 NDRG4Q9ULP0 352 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 NUP214P35658 2090 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 USP34Q70CQ2 3546 aa14.3□□□□□ -0.12
CDK5RAP3-236ENST00000584991 TRBV23OR9-2A0A075B6M9 112 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 MAGEB17A8MXT2 336 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 H0YIV9 168 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 TLR4O00206 839 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PRAMEF4O60810 478 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SCN2BO60939 215 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 IMPDH2P12268 514 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CTSEP14091 401 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 IL5RAQ01344 420 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CHIT1Q13231 466 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ELOAQ14241 798 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ANXA8L1Q5VT79 327 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PRAMEF9Q5VWM5 478 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 IQCHQ86VS3 1027 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 WDR5BQ86VZ2 330 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CYP4Z1Q86W10 505 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SYT12Q8IV01 421 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 C1orf210Q8IVY1 113 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ZZZ3Q8IYH5 903 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 HS3ST5Q8IZT8 346 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ABHD11Q8NFV4 315 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CLHC1Q8NHS4 586 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 FAR1Q8WVX9 515 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 DNASE2BQ8WZ79 361 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CXorf40BQ96DE9 158 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 C11orf24Q96F05 449 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 APIPQ96GX9 242 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 EPYCQ99645 322 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 MENTQ9BUN1 341 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SGPP1Q9BX95 441 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 GSDMCQ9BYG8 508 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 MVB12BQ9H7P6 319 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 IRAK4Q9NWZ3 460 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 UTS2RQ9UKP6 389 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PCOLCE2Q9UKZ9 415 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SH3GLB1Q9Y371 365 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PCDHB11Q9Y5F2 797 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 KNL1Q8NG31 2342 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 E7EQ34 232 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 E9PQ18 207 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 TMX2-CTNND1H3BSU7 103 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 NTRK1P04629 796 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CELA2BP08218 269 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 OCM2P0CE71 109 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 OCMP0CE72 109 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ERGP11308 486 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ENGP17813 658 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PRKACGP22612 351 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 TACR1P25103 407 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PTX3P26022 381 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CD97P48960 835 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 BLKP51451 505 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 GP2P55259 537 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ITGA1P56199 1179 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 C1orf61Q13536 156 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 RAPSNQ13702 412 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 TEAD4Q15561 434 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PROX2Q3B8N5 592 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 WDR45BQ5MNZ6 344 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 OR4F3Q6IEY1 312 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 NIPAL1Q6NVV3 410 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ZCCHC8Q6NZY4 707 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 MAML2Q8IZL2 1156 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SLC15A4Q8N697 577 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 TMEM105Q8N8V8 129 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 WDR20Q8TBZ3 569 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 APOLD1Q96LR9 279 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PITX2Q99697 317 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 REXO4Q9GZR2 422 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CCDC177Q9NQR7 707 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SPATA7Q9P0W8 599 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ZNF624Q9P2J8 865 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 HEBP2Q9Y5Z4 205 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SPAG17Q6Q759 2223 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 SDK1Q7Z5N4 2213 aa14.29□□□□□ -0.12
CDK5RAP3-236ENST00000584991 TP53BP1Q12888 1972 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 A6NCN8 305 aa14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 PTGES3LE9PB15 166 aa14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 KPNA4O00629 521 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 ZNF682O95780 498 aa14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 GSNP06396 782 aa14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 F3P13726 295 aa14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 NPPBP16860 134 aa14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 AGXTP21549 392 aa14.28□□□□□ -0.12
CDK5RAP3-236ENST00000584991 CDKN2CP42773 168 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms