RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ETHE1O95571 254 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 C8orf89P0DMQ9 161 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 JAK1P23458 1154 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 ITGA3P26006 1051 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 CERS1P27544 350 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 TSFMP43897 325 aaKnown RBP23.35■■□□□ 1.33
TSEN54-209ENST00000583454 PKNOX1P55347 436 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 Q0VFX4 171 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 IFT88Q13099 833 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 PCLAFQ15004 111 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 AP5B1Q2VPB7 878 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 NDUFAF7Q7L592 441 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 ZADH2Q8N4Q0 377 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 CCNYL1Q8N7R7 359 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 ACOT4Q8N9L9 421 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 TM9SF4Q92544 642 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 PGM2Q96G03 612 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 FAM111AQ96PZ2 611 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 CENPKQ9BS16 269 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 RBCK1Q9BYM8 510 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 COPS7BQ9H9Q2 264 aaPredicted RBP23.35■■□□□ 1.33
TSEN54-209ENST00000583454 PRM3Q9NNZ6 103 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 SLC17A7Q9P2U7 560 aa23.35■■□□□ 1.33
TSEN54-209ENST00000583454 FAM227AF5H4B4 570 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 PSMD12O00232 456 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-209ENST00000583454 SAP18O00422 153 aaKnown RBP23.34■■□□□ 1.33
TSEN54-209ENST00000583454 PLPP1O14494 284 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 DDAH2O95865 285 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 LDLRP01130 860 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 COX6A1P12074 109 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 HIST1H1TP22492 207 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-209ENST00000583454 MFSD4BQ5TF39 518 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 LIPMQ5VYY2 423 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 TTC19Q6DKK2 380 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-209ENST00000583454 FAAH2Q6GMR7 532 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 OR4C11Q6IEV9 310 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 EXOC3L1Q86VI1 746 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 C10orf107Q8IVU9 208 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 METTL21AQ8WXB1 218 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 MTFMTQ96DP5 389 aaKnown RBP23.34■■□□□ 1.33
TSEN54-209ENST00000583454 SERPINI1Q99574 410 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 WDR77Q9BQA1 342 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-209ENST00000583454 ZNF717Q9BY31 904 aaPredicted RBP23.34■■□□□ 1.33
TSEN54-209ENST00000583454 ZNF700Q9H0M5 742 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 ELOVL6Q9H5J4 265 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 LYRM4Q9HD34 91 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 SSU72Q9NP77 194 aaKnown RBP23.34■■□□□ 1.33
TSEN54-209ENST00000583454 KCMF1Q9P0J7 381 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 DAPP1Q9UN19 280 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 SNX6Q9UNH7 406 aa23.34■■□□□ 1.33
TSEN54-209ENST00000583454 CPAMD8Q8IZJ3 1885 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 IGHV1-45A0A0A0MS14 117 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 A1L4Q6 167 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 B4GALT2O60909 372 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 CDC123O75794 336 aaPredicted RBP23.33■■□□□ 1.33
TSEN54-209ENST00000583454 ESRRBO95718 433 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 HPP00738 406 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 LIM2P55344 173 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 RAB38P57729 211 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 QSOX2Q6ZRP7 698 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 FRMD7Q6ZUT3 714 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 LURAP1LQ8IV03 231 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 CDYL2Q8N8U2 506 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 ADAMTS18Q8TE60 1221 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 AGAP11Q8TF27 550 aa23.33■■□□□ 1.33
TSEN54-209ENST00000583454 COPG1Q9Y678 874 aaKnown RBP23.33■■□□□ 1.33
TSEN54-209ENST00000583454 CYR61O00622 381 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 UBFD1O14562 309 aaKnown RBP23.32■■□□□ 1.32
TSEN54-209ENST00000583454 PRMT3O60678 531 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 TRIM13O60858 407 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 SEMA3DO95025 777 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 PDYNP01213 254 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 BSGP35613 385 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 SSR2P43308 183 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 RAP1GDS1P52306 607 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 EEF1A2Q05639 463 aaKnown RBP23.32■■□□□ 1.32
TSEN54-209ENST00000583454 PCOLCEQ15113 449 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 NSDHLQ15738 373 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 LANCL3Q6ZV70 420 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 ANKRD37Q7Z713 158 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 METTL6Q8TCB7 284 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 SORBS1Q9BX66 1292 aaKnown RBP23.32■■□□□ 1.32
TSEN54-209ENST00000583454 FARSBQ9NSD9 589 aaKnown RBP23.32■■□□□ 1.32
TSEN54-209ENST00000583454 C19orf25Q9UFG5 118 aaPredicted RBP23.32■■□□□ 1.32
TSEN54-209ENST00000583454 ACTL7BQ9Y614 415 aa23.32■■□□□ 1.32
TSEN54-209ENST00000583454 ANKUB1A6NFN9 424 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 H3BQF6 201 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 MANBAO00462 879 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 CLDN1O95832 211 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 KRT6AP02538 564 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 KRT6BP04259 564 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 ENO1P06733 434 aaKnown RBP23.31■■□□□ 1.32
TSEN54-209ENST00000583454 KRT6CP48668 564 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 BTG2P78543 158 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 RCN2Q14257 317 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 ABRAXAS2Q15018 415 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 SGO1Q5FBB7 561 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 CFAP157Q5JU67 520 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 FAM219BQ5XKK7 198 aa23.31■■□□□ 1.32
TSEN54-209ENST00000583454 CPEB2Q7Z5Q1 589 aaKnown RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms