RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 FKBP9P1Q75LS8 142 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 OTOAQ7RTW8 1153 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 PIWIL4Q7Z3Z4 852 aaKnown RBP7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 CEP97Q8IW35 865 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 DENND6AQ8IWF6 608 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 ZNF740Q8NDX6 193 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 NFAM1Q8NET5 270 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 ELP5Q8TE02 316 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 SKA2Q8WVK7 121 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 SMPDL3AQ92484 453 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 PPP1R2P1Q96PQ5 205 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 KIFC1Q9BW19 673 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 DEPPQ9NTK1 212 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 GNPTGQ9UJJ9 305 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 LIPGQ9Y5X9 500 aa7.35□□□□□ -1.23
PPP4R1-225ENST00000583438 A0A1B0GTH9 108 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PRAMEF25A6NGN4 478 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 TMEM200CA6NKL6 621 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 ERI2A8K979 691 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 KDM4EB2RXH2 506 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 GFYI3L273 518 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 ZNF354AO60765 605 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 NSA2O95478 260 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 SP1P08047 785 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CXCR2P25025 360 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 ATP5DP30049 168 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PPP2R1BP30154 601 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 RPA3P35244 121 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 SKIV2L2P42285 1042 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 KCNJ1P48048 391 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 LIMS1P48059 325 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 TTPAP49638 278 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 TERF1P54274 439 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 SLC26A5P58743 744 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 IL2P60568 153 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 TBPL1P62380 186 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 MPP1Q00013 466 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 ALDH6A1Q02252 535 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 ABRAXAS2Q15018 415 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 TMED2Q15363 201 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PCID2Q5JVF3 399 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 GARNL3Q5VVW2 1013 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CD276Q5ZPR3 534 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PEX26Q7Z412 305 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 MDGA2Q7Z553 956 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 LINC00523Q86TU6 105 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CAND1Q86VP6 1230 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 SLC26A11Q86WA9 606 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 SLC13A5Q86YT5 568 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CILP2Q8IUL8 1156 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CCDC71Q8IV32 467 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 LIX1LQ8IVB5 337 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CPNE9Q8IYJ1 553 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CCDC170Q8IYT3 715 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PRELID2Q8N945 189 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PPHLN1Q8NEY8 458 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 OR52N2Q8NGI0 321 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CD200R1Q8TD46 325 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PHF10Q8WUB8 498 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PEX13Q92968 403 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 SDCCAG3Q96C92 435 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 MAGED4Q96JG8 741 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 OR4K3Q96R72 315 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 CDCP1Q9H5V8 836 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 IFT22Q9H7X7 185 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 KCNK13Q9HB14 408 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PLAC1Q9HBJ0 212 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 MMP25Q9NPA2 562 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 DLL4Q9NR61 685 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 FBXO6Q9NRD1 293 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 TRMT1Q9NXH9 659 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 SLC17A6Q9P2U8 582 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 RNF6Q9Y252 685 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 NAALAD2Q9Y3Q0 740 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 PCDHGB6Q9Y5F9 930 aa7.34□□□□□ -1.23
PPP4R1-225ENST00000583438 HEATR5AQ86XA9 2040 aa7.34□□□□□ -1.24
PPP4R1-225ENST00000583438 IGKV3D-11A0A0A0MRZ8 115 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 ZCWPW2A0A1B0GU75 182 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 E9PLN8 166 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 H0YIG0 161 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 PSMD3O43242 534 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 PAX4O43316 350 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 HS6ST1O60243 411 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 KDM1AO60341 852 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 NDUFS3O75489 264 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 SLC25A12O75746 678 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 TPM3P06753 285 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 ANXA5P08758 320 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 MED14OSP0DP75 135 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 CDH1P12830 882 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 MAOAP21397 527 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 PTX3P26022 381 aaPredicted RBP7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 GABRB3P28472 473 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 SDHAP31040 664 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 FDFT1P37268 417 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 SLC1A2P43004 574 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 MEOX1P50221 254 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 HNRNPFP52597 415 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 ITGA8P53708 1063 aa7.33□□□□□ -1.24
PPP4R1-225ENST00000583438 IST1P53990 364 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms