RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 BIKQ13323 160 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 NCF4Q15080 339 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 RPS6KA2Q15349 733 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 VWA5B1Q5TIE3 1220 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 IL23RQ5VWK5 629 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 OGFOD2Q6N063 350 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ZNF517Q6ZMY9 492 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ZNF793Q6ZN11 406 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 LARP4Q71RC2 724 aaKnown RBP eCLIP10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PRSS41Q7RTY9 318 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 UBE3DQ7Z6J8 389 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ZNF595Q8IYB9 648 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 TMEM132CQ8N3T6 1108 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 CDC26Q8NHZ8 85 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 KCNE4Q8WWG9 221 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PEX11GQ96HA9 241 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 C3orf30Q96M34 536 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SORBS1Q9BX66 1292 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 EBPLQ9BY08 206 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ZNF717Q9BY31 904 aaPredicted RBP10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SPRY4Q9C004 299 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 TGIF2Q9GZN2 237 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 MIEF1Q9NQG6 463 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PRDM9Q9NQV7 894 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ASH1LQ9NR48 2969 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 ASIC5Q9NY37 505 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 DKK4Q9UBT3 224 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 DCTN4Q9UJW0 460 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 PSME2Q9UL46 239 aa10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 SMG1Q96Q15 3661 aaKnown RBP10.65□□□□□ -0.7
CDK5RAP3-210ENST00000578733 IGSF10Q6WRI0 2623 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 IGLV3-12A0A075B6K2 115 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 UBDO15205 165 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 EEDO75530 441 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MED26O95402 600 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 B3GALT4O96024 378 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 GBAP04062 536 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 HEXBP07686 556 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PRR35P0CG20 571 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ATXN8OSP0DMR3 200 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 NR2F6P10588 404 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 IDO1P14902 403 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 IDH3AP50213 366 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TAS2R50P59544 299 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DNASE1L3Q13609 305 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RUNX2Q13950 521 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 KIAA0040Q15053 153 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 GSTA3Q16772 222 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 COL28A1Q2UY09 1125 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MINDY4Q4G0A6 757 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 SLC9B1Q4ZJI4 515 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RFTN2Q52LD8 501 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 OR52E8Q6IFG1 317 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MRM1Q6IN84 353 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MRPL14Q6P1L8 145 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 C19orf48Q6RUI8 117 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TIPARPQ7Z3E1 657 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 R3HCC1LQ7Z5L2 792 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DTX1Q86Y01 620 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 AMER3Q8N944 861 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 OR5T3Q8NGG3 340 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 STT3BQ8TCJ2 826 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 C16orf78Q8WTQ4 265 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 CT55Q8WUE5 264 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 METTL21AQ8WXB1 218 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 NKD1Q969G9 470 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RNF31Q96EP0 1072 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FCRL1Q96LA6 429 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PRPF18Q99633 342 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 C1orf50Q9BV19 199 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TMEM120AQ9BXJ8 343 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 DPH1Q9BZG8 443 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FAM107BQ9H098 131 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 EPN3Q9H201 632 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 WDR55Q9H6Y2 383 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RPF2Q9H7B2 306 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 GPN2Q9H9Y4 310 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MYNNQ9NPC7 610 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 GIMAP4Q9NUV9 329 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 C19orf25Q9UFG5 118 aaPredicted RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 CROTQ9UKG9 612 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 FARSAQ9Y285 508 aaKnown RBP10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MMACHCQ9Y4U1 282 aa10.64□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TEX51A0A1B0GUA7 166 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RRP8O43159 456 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PROM1O43490 865 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 TMPRSS11DO60235 418 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 PRMT3O60678 531 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 IL3P08700 152 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ZGLP1P0C6A0 271 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 BCKDHAP12694 445 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 CLNS1AP54105 237 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 HSD17B7P56937 341 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 RAE1P78406 368 aaKnown RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 MC1RQ01726 317 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 KLC1Q07866 573 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 ACTN3Q08043 901 aaPredicted RBP10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 C2orf80Q0P641 193 aa10.63□□□□□ -0.71
CDK5RAP3-210ENST00000578733 STX4Q12846 297 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms