RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 VIPAS39Q9H9C1 493 aa11.95□□□□□ -0.5
CDK5RAP3-203ENST00000577442 WDR41Q9HAD4 459 aa11.95□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ZNF160Q9HCG1 818 aa11.95□□□□□ -0.5
CDK5RAP3-203ENST00000577442 FARSBQ9NSD9 589 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-203ENST00000577442 KCMF1Q9P0J7 381 aa11.95□□□□□ -0.5
CDK5RAP3-203ENST00000577442 VPS29Q9UBQ0 182 aa11.95□□□□□ -0.5
CDK5RAP3-203ENST00000577442 PCSK5Q92824 1860 aa11.95□□□□□ -0.5
CDK5RAP3-203ENST00000577442 IGKV3D-11A0A0A0MRZ8 115 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 A0A0A6YYD5 115 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TCRBV16S1A1N1A0A5B0 115 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SERTM1A2A2V5 107 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 FAM227AF5H4B4 570 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 CYR61O00622 381 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 UBFD1O14562 309 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 AZIN1O14977 448 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 GUCY1B2O75343 617 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 EEDO75530 441 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SERPINA7P05543 415 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 NR2F6P10588 404 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 EFNA3P52797 238 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 MAGOHP61326 146 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TNFRSF17Q02223 184 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ACSM2AQ08AH3 577 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SLC13A2Q13183 592 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SLAMF1Q13291 335 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 EXT1Q16394 746 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 IMPG1Q17R60 797 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SPIN4Q56A73 249 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SFT2D3Q587I9 215 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 HHATQ5VTY9 493 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ACSM2BQ68CK6 577 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 JMJD6Q6NYC1 403 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 PAPD4Q6PIY7 484 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 COMMD6Q7Z4G1 85 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 HPS6Q86YV9 775 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TLCD1Q96CP7 247 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ABHD17AQ96GS6 310 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 KCNA7Q96RP8 456 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 CSF3RQ99062 836 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 HBEGFQ99075 208 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 MRPL1Q9BYD6 325 aaKnown RBP11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 LHPPQ9H008 270 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SLC25A18Q9H1K4 315 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 NKIRAS1Q9NYS0 192 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 FBXW2Q9UKT8 454 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ZNF451Q9Y4E5 1061 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TIMM22Q9Y584 194 aa11.94□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SMG1Q96Q15 3661 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 CROCCQ5TZA2 2017 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TMEM120BA0PK00 339 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 OR2W5A6NFC9 320 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 A6NL46 340 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TMEM114B3SHH9 223 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 CTNSO60931 367 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SEC24DO94855 1032 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SNUPNO95149 360 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SERPINE1P05121 402 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 UQCRHP07919 91 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 FAM58BPP0C7Q3 252 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 DHRS4L1P0CG22 281 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 NEFHP12036 1026 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 MAOAP21397 527 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 HTR6P50406 440 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 MAPK12P53778 367 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SLC18A1P54219 525 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 BTG2P78543 158 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 STX4Q12846 297 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 BIKQ13323 160 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SERTAD2Q14140 314 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TERF2Q15554 542 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SOWAHCQ53LP3 525 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ARL13AQ5H913 290 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 CCNYL2Q5T2Q4 361 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 PLAG1Q6DJT9 500 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 MRM1Q6IN84 353 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ZCCHC23Q6ZST2 131 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 PARP9Q8IXQ6 854 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 KIRREL3Q8IZU9 778 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SHISA5Q8N114 240 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 FDCSPQ8NFU4 85 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TM9SF4Q92544 642 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TANKQ92844 425 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ZBTB9Q96C00 473 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 BBC3Q96PG8 261 aaPredicted RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ACPTQ9BZG2 426 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 ACBD3Q9H3P7 528 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 RPF2Q9H7B2 306 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 C5AR2Q9P296 337 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TP53TG5Q9Y2B4 290 aa11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 PRRC2CQ9Y520 2896 aaKnown RBP11.93□□□□□ -0.5
CDK5RAP3-203ENST00000577442 SAGE2PA6NJ88 616 aa11.92□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TMPRSS11DO60235 418 aa11.92□□□□□ -0.5
CDK5RAP3-203ENST00000577442 RSL1D1O76021 490 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-203ENST00000577442 KLK1P06870 262 aa11.92□□□□□ -0.5
CDK5RAP3-203ENST00000577442 PRR35P0CG20 571 aa11.92□□□□□ -0.5
CDK5RAP3-203ENST00000577442 GRK2P25098 689 aa11.92□□□□□ -0.5
CDK5RAP3-203ENST00000577442 TPP2P29144 1249 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-203ENST00000577442 HNRNPFP52597 415 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-203ENST00000577442 FOXA1P55317 472 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms